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Items: 1 to 20 of 102

1.

Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters.

Hung T, Wang Y, Lin MF, Koegel AK, Kotake Y, Grant GD, Horlings HM, Shah N, Umbricht C, Wang P, Wang Y, Kong B, Langerød A, Børresen-Dale AL, Kim SK, van de Vijver M, Sukumar S, Whitfield ML, Kellis M, Xiong Y, Wong DJ, Chang HY.

Nat Genet. 2011 Jun 5;43(7):621-9. doi: 10.1038/ng.848.

2.

The long reach of noncoding RNAs.

Sotillo E, Thomas-Tikhonenko A.

Nat Genet. 2011 Jun 28;43(7):616-7. doi: 10.1038/ng.870. No abstract available.

3.

Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer.

Tahira AC, Kubrusly MS, Faria MF, Dazzani B, Fonseca RS, Maracaja-Coutinho V, Verjovski-Almeida S, Machado MC, Reis EM.

Mol Cancer. 2011 Nov 13;10:141. doi: 10.1186/1476-4598-10-141.

4.

Oct4 targets regulatory nodes to modulate stem cell function.

Campbell PA, Perez-Iratxeta C, Andrade-Navarro MA, Rudnicki MA.

PLoS One. 2007 Jun 20;2(6):e553.

5.

Contrasting expression patterns of coding and noncoding parts of the human genome upon oxidative stress.

Giannakakis A, Zhang J, Jenjaroenpun P, Nama S, Zainolabidin N, Aau MY, Yarmishyn AA, Vaz C, Ivshina AV, Grinchuk OV, Voorhoeve M, Vardy LA, Sampath P, Kuznetsov VA, Kurochkin IV, Guccione E.

Sci Rep. 2015 May 29;5:9737. doi: 10.1038/srep09737.

6.

FOXO3 modulates endothelial gene expression and function by classical and alternative mechanisms.

Czymai T, Viemann D, Sticht C, Molema G, Goebeler M, Schmidt M.

J Biol Chem. 2010 Apr 2;285(14):10163-78. doi: 10.1074/jbc.M109.056663. Epub 2010 Feb 1.

7.

FOXO transcription factors control E2F1 transcriptional specificity and apoptotic function.

Shats I, Gatza ML, Liu B, Angus SP, You L, Nevins JR.

Cancer Res. 2013 Oct 1;73(19):6056-67. doi: 10.1158/0008-5472.CAN-13-0453. Epub 2013 Aug 21.

8.

The elongation complex components BRD4 and MLLT3/AF9 are transcriptional coactivators of nuclear retinoid receptors.

Flajollet S, Rachez C, Ploton M, Schulz C, Gallais R, Métivier R, Pawlak M, Leray A, Issulahi AA, Héliot L, Staels B, Salbert G, Lefebvre P.

PLoS One. 2013 Jun 10;8(6):e64880. doi: 10.1371/journal.pone.0064880. Print 2013.

9.

[Analysis of the transcriptional regulatory network in the model organisms: yeast and sea urchin].

Takamatsu K, Takeda T.

Tanpakushitsu Kakusan Koso. 2004 Dec;49(17 Suppl):2742-50. Review. Japanese. No abstract available.

PMID:
15669249
10.

Functional redundancy of two Pax-like proteins in transcriptional activation of cyst wall protein genes in Giardia lamblia.

Chuang SF, Su LH, Cho CC, Pan YJ, Sun CH.

PLoS One. 2012;7(2):e30614. doi: 10.1371/journal.pone.0030614. Epub 2012 Feb 15.

11.

The role of Mediator in small and long noncoding RNA production in Arabidopsis thaliana.

Kim YJ, Zheng B, Yu Y, Won SY, Mo B, Chen X.

EMBO J. 2011 Mar 2;30(5):814-22. doi: 10.1038/emboj.2011.3. Epub 2011 Jan 21.

12.

Long noncoding RNAs as a novel component of the Myc transcriptional network.

Winkle M, van den Berg A, Tayari M, Sietzema J, Terpstra M, Kortman G, de Jong D, Visser L, Diepstra A, Kok K, Kluiver J.

FASEB J. 2015 Jun;29(6):2338-46. doi: 10.1096/fj.14-263889. Epub 2015 Feb 17.

13.

Association of Tat with promoters of PTEN and PP2A subunits is key to transcriptional activation of apoptotic pathways in HIV-infected CD4+ T cells.

Kim N, Kukkonen S, Gupta S, Aldovini A.

PLoS Pathog. 2010 Sep 16;6(9):e1001103. doi: 10.1371/journal.ppat.1001103.

14.

Distinct DNA-based epigenetic switches trigger transcriptional activation of silent genes in human dermal fibroblasts.

Pandian GN, Taniguchi J, Junetha S, Sato S, Han L, Saha A, AnandhaKumar C, Bando T, Nagase H, Vaijayanthi T, Taylor RD, Sugiyama H.

Sci Rep. 2014 Jan 24;4:3843. doi: 10.1038/srep03843.

15.

Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells.

Sheik Mohamed J, Gaughwin PM, Lim B, Robson P, Lipovich L.

RNA. 2010 Feb;16(2):324-37. doi: 10.1261/rna.1441510. Epub 2009 Dec 21.

16.

Computer-assisted identification of cell cycle-related genes: new targets for E2F transcription factors.

Kel AE, Kel-Margoulis OV, Farnham PJ, Bartley SM, Wingender E, Zhang MQ.

J Mol Biol. 2001 May 25;309(1):99-120.

PMID:
11491305
17.

A new lncRNA, APTR, associates with and represses the CDKN1A/p21 promoter by recruiting polycomb proteins.

Negishi M, Wongpalee SP, Sarkar S, Park J, Lee KY, Shibata Y, Reon BJ, Abounader R, Suzuki Y, Sugano S, Dutta A.

PLoS One. 2014 Apr 18;9(4):e95216. doi: 10.1371/journal.pone.0095216. eCollection 2014.

18.

DN-p73 is activated after DNA damage in a p53-dependent manner to regulate p53-induced cell cycle arrest.

Vossio S, Palescandolo E, Pediconi N, Moretti F, Balsano C, Levrero M, Costanzo A.

Oncogene. 2002 May 23;21(23):3796-803.

19.

The THAP-zinc finger protein THAP1 regulates endothelial cell proliferation through modulation of pRB/E2F cell-cycle target genes.

Cayrol C, Lacroix C, Mathe C, Ecochard V, Ceribelli M, Loreau E, Lazar V, Dessen P, Mantovani R, Aguilar L, Girard JP.

Blood. 2007 Jan 15;109(2):584-94. Epub 2006 Sep 26.

20.

Kdm2b maintains murine embryonic stem cell status by recruiting PRC1 complex to CpG islands of developmental genes.

He J, Shen L, Wan M, Taranova O, Wu H, Zhang Y.

Nat Cell Biol. 2013 Apr;15(4):373-84. doi: 10.1038/ncb2702. Epub 2013 Mar 17.

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