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Results: 1 to 20 of 77

2.

A species-level phylogenetic study of the Verbena complex (Verbenaceae) indicates two independent intergeneric chloroplast transfers.

Yuan YW, Olmstead RG.

Mol Phylogenet Evol. 2008 Jul;48(1):23-33. doi: 10.1016/j.ympev.2008.04.004. Epub 2008 Apr 14.

PMID:
18495498
[PubMed - indexed for MEDLINE]
3.

Is homoplasy or lineage sorting the source of incongruent mtdna and nuclear gene trees in the stiff-tailed ducks (Nomonyx-Oxyura)?

McCracken K, Sorenson M.

Syst Biol. 2005 Feb;54(1):35-55.

PMID:
15805009
[PubMed - indexed for MEDLINE]
4.

Gene trees versus species trees: reassessing life-history evolution in a freshwater fish radiation.

Waters JM, Rowe DL, Burridge CP, Wallis GP.

Syst Biol. 2010 Oct;59(5):504-17. doi: 10.1093/sysbio/syq031. Epub 2010 Jul 5.

PMID:
20603441
[PubMed - indexed for MEDLINE]
5.

An empirical demonstration of using pentatricopeptide repeat (PPR) genes as plant phylogenetic tools: phylogeny of Verbenaceae and the Verbena complex.

Yuan YW, Liu C, Marx HE, Olmstead RG.

Mol Phylogenet Evol. 2010 Jan;54(1):23-35. doi: 10.1016/j.ympev.2009.08.029. Epub 2009 Sep 3.

PMID:
19733248
[PubMed - indexed for MEDLINE]
6.

Phylogenetic utility of the second intron of LEAFY in Neillia and Stephanandra (Rosaceae) and implications for the origin of Stephanandra.

Oh SH, Potter D.

Mol Phylogenet Evol. 2003 Nov;29(2):203-15.

PMID:
13678677
[PubMed - indexed for MEDLINE]
7.

The granule-bound starch synthase (GBSSI) gene in the Rosaceae: multiple loci and phylogenetic utility.

Evans RC, Alice LA, Campbell CS, Kellogg EA, Dickinson TA.

Mol Phylogenet Evol. 2000 Dec;17(3):388-400.

PMID:
11133193
[PubMed - indexed for MEDLINE]
8.

Phylogenetic relationships in the genus Cyprinella (Actinopterygii: Cyprinidae) based on mitochondrial and nuclear gene sequences.

Schönhuth S, Mayden RL.

Mol Phylogenet Evol. 2010 Apr;55(1):77-98. doi: 10.1016/j.ympev.2009.10.030. Epub 2009 Nov 10.

PMID:
19903533
[PubMed - indexed for MEDLINE]
9.

Gene trees, species trees, and morphology converge on a similar phylogeny of living gars (Actinopterygii: Holostei: Lepisosteidae), an ancient clade of ray-finned fishes.

Wright JJ, David SR, Near TJ.

Mol Phylogenet Evol. 2012 Jun;63(3):848-56. doi: 10.1016/j.ympev.2012.02.033. Epub 2012 Mar 14.

PMID:
22445447
[PubMed - indexed for MEDLINE]
10.

Estimating phylogenetic relationships despite discordant gene trees across loci: the species tree of a diverse species group of feather mites (Acari: Proctophyllodidae).

Knowles LL, Klimov PB.

Parasitology. 2011 Nov;138(13):1750-9. doi: 10.1017/S003118201100031X. Epub 2011 Apr 20.

PMID:
21554840
[PubMed - indexed for MEDLINE]
11.

Using phylogenies of pheromone receptor genes in the Microbotryum violaceum species complex to investigate possible speciation by hybridization.

Devier B, Aguileta G, Hood ME, Giraud T.

Mycologia. 2010 May-Jun;102(3):689-96.

PMID:
20524600
[PubMed - indexed for MEDLINE]
Free Article
12.

Estimating species phylogeny from gene-tree probabilities despite incomplete lineage sorting: an example from Melanoplus grasshoppers.

Carstens BC, Knowles LL.

Syst Biol. 2007 Jun;56(3):400-11.

PMID:
17520504
[PubMed - indexed for MEDLINE]
13.

Inferring phylogeny despite incomplete lineage sorting.

Maddison WP, Knowles LL.

Syst Biol. 2006 Feb;55(1):21-30.

PMID:
16507521
[PubMed - indexed for MEDLINE]
14.

Generating single-copy nuclear gene data for a recent adaptive radiation.

Whittall JB, Medina-Marino A, Zimmer EA, Hodges SA.

Mol Phylogenet Evol. 2006 Apr;39(1):124-34. Epub 2005 Nov 28.

PMID:
16314114
[PubMed - indexed for MEDLINE]
15.

A practical approach to phylogenomics: the phylogeny of ray-finned fish (Actinopterygii) as a case study.

Li C, Ortí G, Zhang G, Lu G.

BMC Evol Biol. 2007 Mar 20;7:44.

PMID:
17374158
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Maximum likelihood estimates of species trees: how accuracy of phylogenetic inference depends upon the divergence history and sampling design.

McCormack JE, Huang H, Knowles LL.

Syst Biol. 2009 Oct;58(5):501-8. doi: 10.1093/sysbio/syp045. Epub 2009 Aug 20.

PMID:
20525604
[PubMed - indexed for MEDLINE]
17.

Phylogenetic utility of histone H3 intron sequences in the perennial relatives of soybean (Glycine: Leguminosae).

Doyle JJ, Kanazin V, Shoemaker RC.

Mol Phylogenet Evol. 1996 Dec;6(3):438-47.

PMID:
8975698
[PubMed - indexed for MEDLINE]
18.

Using AFLP to resolve phylogenetic relationships in a morphologically diversified plant species complex when nuclear and chloroplast sequences fail to reveal variability.

Després L, Gielly L, Redoutet B, Taberlet P.

Mol Phylogenet Evol. 2003 May;27(2):185-96. Erratum in: Mol Phylogenet Evol. 2004 Jan;30(1):258.

PMID:
12695084
[PubMed - indexed for MEDLINE]
19.

A six nuclear gene phylogeny of Citrus (Rutaceae) taking into account hybridization and lineage sorting.

Ramadugu C, Pfeil BE, Keremane ML, Lee RF, Maureira-Butler IJ, Roose ML.

PLoS One. 2013 Jul 16;8(7):e68410. doi: 10.1371/journal.pone.0068410. Print 2013.

PMID:
23874615
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Molecular phylogeny of hybridizing species from the genus Spartina Schreb. (Poaceae).

Baumel A, Ainouche ML, Bayer RJ, Ainouche AK, Misset MT.

Mol Phylogenet Evol. 2002 Feb;22(2):303-14.

PMID:
11820850
[PubMed - indexed for MEDLINE]
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