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Results: 1 to 20 of 87

1.

Three-dimensional reconstruction of serial mouse brain sections: solution for flattening high-resolution large-scale mosaics.

Berlanga ML, Phan S, Bushong EA, Wu S, Kwon O, Phung BS, Lamont S, Terada M, Tasdizen T, Martone ME, Ellisman MH.

Front Neuroanat. 2011 Mar 7;5:17. doi: 10.3389/fnana.2011.00017. eCollection 2011.

PMID:
21629828
[PubMed]
Free PMC Article
2.

Serial section registration of axonal confocal microscopy datasets for long-range neural circuit reconstruction.

Hogrebe L, Paiva AR, Jurrus E, Christensen C, Bridge M, Dai L, Pfeiffer RL, Hof PR, Roysam B, Korenberg JR, Tasdizen T.

J Neurosci Methods. 2012 Jun 15;207(2):200-10. doi: 10.1016/j.jneumeth.2012.03.002. Epub 2012 Mar 28.

PMID:
22465678
[PubMed - indexed for MEDLINE]
3.

Assessment and statistical modeling of the relationship between remotely sensed aerosol optical depth and PM2.5 in the eastern United States.

Paciorek CJ, Liu Y; HEI Health Review Committee.

Res Rep Health Eff Inst. 2012 May;(167):5-83; discussion 85-91.

PMID:
22838153
[PubMed - indexed for MEDLINE]
4.

Serial section electron tomography: a method for three-dimensional reconstruction of large structures.

Soto GE, Young SJ, Martone ME, Deerinck TJ, Lamont S, Carragher BO, Hama K, Ellisman MH.

Neuroimage. 1994 Jun;1(3):230-43.

PMID:
9343574
[PubMed - indexed for MEDLINE]
5.

Reconstruct: a free editor for serial section microscopy.

Fiala JC.

J Microsc. 2005 Apr;218(Pt 1):52-61.

PMID:
15817063
[PubMed - indexed for MEDLINE]
6.

Knife-edge scanning microscopy for imaging and reconstruction of three-dimensional anatomical structures of the mouse brain.

Mayerich D, Abbott L, McCormick B.

J Microsc. 2008 Jul;231(Pt 1):134-43. doi: 10.1111/j.1365-2818.2008.02024.x.

PMID:
18638197
[PubMed - indexed for MEDLINE]
7.

High-resolution digital brain atlases: a Hubble telescope for the brain.

Jones EG, Stone JM, Karten HJ.

Ann N Y Acad Sci. 2011 May;1225 Suppl 1:E147-59. doi: 10.1111/j.1749-6632.2011.06009.x.

PMID:
21599693
[PubMed - indexed for MEDLINE]
8.

Extending unbiased stereology of brain ultrastructure to three-dimensional volumes.

Fiala JC, Harris KM.

J Am Med Inform Assoc. 2001 Jan-Feb;8(1):1-16.

PMID:
11141509
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

New high-resolution 2-deoxyglucose method featuring double labeling and automated data collection.

McCasland JS, Woolsey TA.

J Comp Neurol. 1988 Dec 22;278(4):543-54.

PMID:
3068265
[PubMed - indexed for MEDLINE]
10.

Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).

Foffi G, Pastore A, Piazza F, Temussi PA.

Phys Biol. 2013 Aug 2;10(4):040301. [Epub ahead of print]

PMID:
23912807
[PubMed - as supplied by publisher]
11.

As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets.

Saalfeld S, Cardona A, Hartenstein V, Tomančák P.

Bioinformatics. 2010 Jun 15;26(12):i57-63. doi: 10.1093/bioinformatics/btq219.

PMID:
20529937
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Combining confocal laser scanning microscopy with serial section reconstruction in the study of adult neurogenesis.

Luzzati F, Fasolo A, Peretto P.

Front Neurosci. 2011 May 13;5:70. doi: 10.3389/fnins.2011.00070. eCollection 2011.

PMID:
21625612
[PubMed]
Free PMC Article
13.

Showing their true colors: a practical approach to volume rendering from serial sections.

Handschuh S, Schwaha T, Metscher BD.

BMC Dev Biol. 2010 Apr 21;10:41. doi: 10.1186/1471-213X-10-41.

PMID:
20409315
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Micron-scale resolution optical tomography of entire mouse brains with confocal light sheet microscopy.

Silvestri L, Bria A, Costantini I, Sacconi L, Peng H, Iannello G, Pavone FS.

J Vis Exp. 2013 Oct 8;(80). doi: 10.3791/50696.

PMID:
24145191
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

MRI-guided volume reconstruction of mouse brain from histological sections.

Yang Z, Richards K, Kurniawan ND, Petrou S, Reutens DC.

J Neurosci Methods. 2012 Nov 15;211(2):210-7. doi: 10.1016/j.jneumeth.2012.08.021. Epub 2012 Sep 7.

PMID:
22981936
[PubMed - indexed for MEDLINE]
16.

Volume reconstruction of large tissue specimens from serial physical sections using confocal microscopy and correction of cutting deformations by elastic registration.

Capek M, Brůza P, Janácek J, Karen P, Kubínová L, Vagnerová R.

Microsc Res Tech. 2009 Feb;72(2):110-9. doi: 10.1002/jemt.20652.

PMID:
19003887
[PubMed - indexed for MEDLINE]
17.

Three-dimensional transmission electron microscopy and its application to mitosis research.

McEwen BF, Marko M.

Methods Cell Biol. 1999;61:81-111. Review.

PMID:
9891310
[PubMed - indexed for MEDLINE]
18.
19.

High resolution stereoscopic volume visualization of the mouse arginine vasopressin system.

Clements RJ, Mintz EM, Blank JL.

J Neurosci Methods. 2010 Mar 15;187(1):41-5. doi: 10.1016/j.jneumeth.2009.12.011. Epub 2009 Dec 29.

PMID:
20036282
[PubMed - indexed for MEDLINE]
20.

Automated microscopy system for mosaic acquisition and processing.

Chow SK, Hakozaki H, Price DL, MacLean NA, Deerinck TJ, Bouwer JC, Martone ME, Peltier ST, Ellisman MH.

J Microsc. 2006 May;222(Pt 2):76-84.

PMID:
16774516
[PubMed]

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