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Items: 1 to 20 of 108

1.

Biosynthesis and function of tRNA modifications in Archaea.

Phillips G, de Crécy-Lagard V.

Curr Opin Microbiol. 2011 Jun;14(3):335-41. doi: 10.1016/j.mib.2011.03.001. Epub 2011 Apr 4. Review.

PMID:
21470902
2.

Two different mechanisms for tRNA ribose methylation in Archaea: a short survey.

Clouet-d'Orval B, Gaspin C, Mougin A.

Biochimie. 2005 Sep-Oct;87(9-10):889-95. Epub 2005 Mar 7.

PMID:
16164996
3.

Biosynthesis and function of posttranscriptional modifications of transfer RNAs.

El Yacoubi B, Bailly M, de Crécy-Lagard V.

Annu Rev Genet. 2012;46:69-95. doi: 10.1146/annurev-genet-110711-155641. Epub 2012 Aug 16. Review.

PMID:
22905870
4.

RNomics and Modomics in the halophilic archaea Haloferax volcanii: identification of RNA modification genes.

Grosjean H, Gaspin C, Marck C, Decatur WA, de Crécy-Lagard V.

BMC Genomics. 2008 Oct 9;9:470. doi: 10.1186/1471-2164-9-470.

5.

A Gateway platform for functional genomics in Haloferax volcanii: deletion of three tRNA modification genes.

El Yacoubi B, Phillips G, Blaby IK, Haas CE, Cruz Y, Greenberg J, de Crécy-Lagard V.

Archaea. 2009 Feb 12;2(4):211-9.

6.

Posttranscriptional modification of tRNA in thermophilic archaea (Archaebacteria).

Edmonds CG, Crain PF, Gupta R, Hashizume T, Hocart CH, Kowalak JA, Pomerantz SC, Stetter KO, McCloskey JA.

J Bacteriol. 1991 May;173(10):3138-48.

7.

In vivo processing of an intron-containing archael tRNA.

Nieuwlandt DT, Carr MB, Daniels CJ.

Mol Microbiol. 1993 Apr;8(1):93-9.

PMID:
7684487
8.

Biosynthesis of archaeosine, a novel derivative of 7-deazaguanosine specific to archaeal tRNA, proceeds via a pathway involving base replacement on the tRNA polynucleotide chain.

Watanabe M, Matsuo M, Tanaka S, Akimoto H, Asahi S, Nishimura S, Katze JR, Hashizume T, Crain PF, McCloskey JA, Okada N.

J Biol Chem. 1997 Aug 8;272(32):20146-51.

9.

Nonsense suppression in archaea.

Bhattacharya A, Köhrer C, Mandal D, RajBhandary UL.

Proc Natl Acad Sci U S A. 2015 May 12;112(19):6015-20. doi: 10.1073/pnas.1501558112. Epub 2015 Apr 27.

10.

Aminoacyl-tRNA synthesis in archaea: different but not unique.

Praetorius-Ibba M, Ibba M.

Mol Microbiol. 2003 May;48(3):631-7. Review.

11.

Archaeal aminoacyl-tRNA synthesis: diversity replaces dogma.

Tumbula D, Vothknecht UC, Kim HS, Ibba M, Min B, Li T, Pelaschier J, Stathopoulos C, Becker H, Söll D.

Genetics. 1999 Aug;152(4):1269-76. Review.

12.

Comprehensive analysis of archaeal tRNA genes reveals rapid increase of tRNA introns in the order thermoproteales.

Sugahara J, Kikuta K, Fujishima K, Yachie N, Tomita M, Kanai A.

Mol Biol Evol. 2008 Dec;25(12):2709-16. doi: 10.1093/molbev/msn216. Epub 2008 Oct 1.

13.

Biosynthesis of wyosine derivatives in tRNA: an ancient and highly diverse pathway in Archaea.

de Crécy-Lagard V, Brochier-Armanet C, Urbonavicius J, Fernandez B, Phillips G, Lyons B, Noma A, Alvarez S, Droogmans L, Armengaud J, Grosjean H.

Mol Biol Evol. 2010 Sep;27(9):2062-77. doi: 10.1093/molbev/msq096. Epub 2010 Apr 9.

14.

A role for tRNA modifications in genome structure and codon usage.

Novoa EM, Pavon-Eternod M, Pan T, Ribas de Pouplana L.

Cell. 2012 Mar 30;149(1):202-13. doi: 10.1016/j.cell.2012.01.050.

15.

Precise analysis of modification status at various stage of tRNA maturation in Saccharomyces cerevisiae.

Ohira T, Miyauchi K, Sakaguchi Y, Suzuki T, Suzuki T.

Nucleic Acids Symp Ser (Oxf). 2009;(53):301-2. doi: 10.1093/nass/nrp151.

16.

Recent progress of structural biology of tRNA processing and modification.

Nakanishi K, Nureki O.

Mol Cells. 2005 Apr 30;19(2):157-66. Review.

17.

The structural basis for specific decoding of AUA by isoleucine tRNA on the ribosome.

Voorhees RM, Mandal D, Neubauer C, Köhrer C, RajBhandary UL, Ramakrishnan V.

Nat Struct Mol Biol. 2013 May;20(5):641-3. doi: 10.1038/nsmb.2545. Epub 2013 Mar 31.

19.

Two archaeal tRNase Z enzymes: similar but different.

Späth B, Schubert S, Lieberoth A, Settele F, Schütz S, Fischer S, Marchfelder A.

Arch Microbiol. 2008 Sep;190(3):301-8. doi: 10.1007/s00203-008-0368-4. Epub 2008 Apr 25.

PMID:
18437358
20.

Agmatine-conjugated cytidine in a tRNA anticodon is essential for AUA decoding in archaea.

Ikeuchi Y, Kimura S, Numata T, Nakamura D, Yokogawa T, Ogata T, Wada T, Suzuki T, Suzuki T.

Nat Chem Biol. 2010 Apr;6(4):277-82. doi: 10.1038/nchembio.323. Epub 2010 Feb 7.

PMID:
20139989
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