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Results: 1 to 20 of 127

1.

Evolutionary constraint in flanking regions of avian genes.

Künstner A, Nabholz B, Ellegren H.

Mol Biol Evol. 2011 Sep;28(9):2481-9. doi: 10.1093/molbev/msr066. Epub 2011 Apr 4.

PMID:
21393603
[PubMed - indexed for MEDLINE]
Free Article
2.

Significant selective constraint at 4-fold degenerate sites in the avian genome and its consequence for detection of positive selection.

Künstner A, Nabholz B, Ellegren H.

Genome Biol Evol. 2011;3:1381-9. doi: 10.1093/gbe/evr112. Epub 2011 Oct 31.

PMID:
22042333
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Comparative analysis of orthologous eukaryotic mRNAs: potential hidden functional signals.

Shabalina SA, Ogurtsov AY, Rogozin IB, Koonin EV, Lipman DJ.

Nucleic Acids Res. 2004 Mar 18;32(5):1774-82. Print 2004.

PMID:
15031317
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Positive and negative selection on noncoding DNA close to protein-coding genes in wild house mice.

Kousathanas A, Oliver F, Halligan DL, Keightley PD.

Mol Biol Evol. 2011 Mar;28(3):1183-91. doi: 10.1093/molbev/msq299. Epub 2010 Nov 8.

PMID:
21059791
[PubMed - indexed for MEDLINE]
Free Article
5.

Molecular evolution of genes in avian genomes.

Nam K, Mugal C, Nabholz B, Schielzeth H, Wolf JB, Backström N, Künstner A, Balakrishnan CN, Heger A, Ponting CP, Clayton DF, Ellegren H.

Genome Biol. 2010;11(6):R68. doi: 10.1186/gb-2010-11-6-r68. Epub 2010 Jun 23.

PMID:
20573239
[PubMed - indexed for MEDLINE]
Free PMC Article
6.
7.

Accelerated evolution of 3'avian FOXE1 genes, and thyroid and feather specific expression of chicken FoxE1.

Yaklichkin SY, Darnell DK, Pier MV, Antin PB, Hannenhalli S.

BMC Evol Biol. 2011 Oct 15;11:302. doi: 10.1186/1471-2148-11-302.

PMID:
21999483
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

[Analysis of correlation of local GC level in human protein coding genes].

Chen XG, Hu J, Yang X.

Yi Chuan. 2008 Sep;30(9):1169-74. Chinese.

PMID:
18779175
[PubMed - indexed for MEDLINE]
9.

Evolutionary dynamics of mammalian mRNA untranslated regions by comparative analysis of orthologous human, artiodactyl and rodent gene pairs.

Larizza A, Makalowski W, Pesole G, Saccone C.

Comput Chem. 2002 Jul;26(5):479-90.

PMID:
12144177
[PubMed - indexed for MEDLINE]
10.

Assignment of orthologous relationships among mammalian alpha-globin genes by examining flanking regions reveals a rapid rate of evolution.

Hardison RC, Gelinas RE.

Mol Biol Evol. 1986 May;3(3):243-61.

PMID:
3444401
[PubMed - indexed for MEDLINE]
11.
12.

Comparative sequence analysis of the phytochrome C gene and its upstream region in allohexaploid wheat reveals new data on the evolution of its three constituent genomes.

Devos KM, Beales J, Ogihara Y, Doust AN.

Plant Mol Biol. 2005 Jul;58(5):625-41.

PMID:
16158239
[PubMed - indexed for MEDLINE]
13.

Utilization of a zebra finch BAC library to determine the structure of an avian androgen receptor genomic region.

Luo M, Yu Y, Kim H, Kudrna D, Itoh Y, Agate RJ, Melamed E, Goicoechea JL, Talag J, Mueller C, Wang W, Currie J, Sisneros NB, Wing RA, Arnold AP.

Genomics. 2006 Jan;87(1):181-90. Erratum in: Genomics. 2006 May;87(5):678-9.

PMID:
16321505
[PubMed - indexed for MEDLINE]
Free Article
14.

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution.

International Chicken Genome Sequencing Consortium.

Nature. 2004 Dec 9;432(7018):695-716. Erratum in: Nature. 2005 Feb 17;433(7027):777.

PMID:
15592404
[PubMed - indexed for MEDLINE]
15.

Phylogenetic analysis of mRNA polyadenylation sites reveals a role of transposable elements in evolution of the 3'-end of genes.

Lee JY, Ji Z, Tian B.

Nucleic Acids Res. 2008 Oct;36(17):5581-90. doi: 10.1093/nar/gkn540. Epub 2008 Aug 30.

PMID:
18757892
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Mammalian BEX, WEX and GASP genes: coding and non-coding chimaerism sustained by gene conversion events.

Winter EE, Ponting CP.

BMC Evol Biol. 2005 Oct 12;5:54.

PMID:
16221301
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Evolution of the influenza A virus untranslated regions.

Furuse Y, Oshitani H.

Infect Genet Evol. 2011 Jul;11(5):1150-4. doi: 10.1016/j.meegid.2011.04.006. Epub 2011 Apr 14.

PMID:
21515407
[PubMed - indexed for MEDLINE]
18.

Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA.

Polavarapu N, Mariño-Ramírez L, Landsman D, McDonald JF, Jordan IK.

BMC Genomics. 2008 May 17;9:226. doi: 10.1186/1471-2164-9-226.

PMID:
18485226
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Distribution and intensity of constraint in mammalian genomic sequence.

Cooper GM, Stone EA, Asimenos G; NISC Comparative Sequencing Program, Green ED, Batzoglou S, Sidow A.

Genome Res. 2005 Jul;15(7):901-13. Epub 2005 Jun 17.

PMID:
15965027
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

The alpha A-crystallin gene: conserved features of the 5'-flanking regions in human, mouse, and chicken.

Jaworski CJ, Chepelinsky AB, Piatigorsky J.

J Mol Evol. 1991 Dec;33(6):495-505.

PMID:
1779432
[PubMed - indexed for MEDLINE]

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