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Results: 1 to 20 of 55

1.

Mi-DISCOVERER: A bioinformatics tool for the detection of mi-RNA in human genome.

Arshad S, Mumtaz A, Ahmad F, Liaquat S, Nadeem S, Mehboob S, Afzal M.

Bioinformation. 2010 Nov 27;5(6):271-6.

PMID:
21364831
[PubMed]
Free PMC Article
2.

CID-miRNA: a web server for prediction of novel miRNA precursors in human genome.

Tyagi S, Vaz C, Gupta V, Bhatia R, Maheshwari S, Srinivasan A, Bhattacharya A.

Biochem Biophys Res Commun. 2008 Aug 8;372(4):831-4. doi: 10.1016/j.bbrc.2008.05.134. Epub 2008 Jun 2.

PMID:
18522801
[PubMed - indexed for MEDLINE]
3.

Computational identification of new porcine microRNAs and their targets.

Zhou B, Liu HL.

Anim Sci J. 2010 Jun;81(3):290-6. doi: 10.1111/j.1740-0929.2010.00742.x.

PMID:
20597884
[PubMed - indexed for MEDLINE]
4.

Computational identification of novel microRNAs and targets in Brassica napus.

Xie FL, Huang SQ, Guo K, Xiang AL, Zhu YY, Nie L, Yang ZM.

FEBS Lett. 2007 Apr 3;581(7):1464-74. Epub 2007 Mar 8.

PMID:
17367786
[PubMed - indexed for MEDLINE]
Free Article
5.
6.

Characterizing viral microRNAs and its application on identifying new microRNAs in viruses.

Pan X, Zhang B, San Francisco M, Cobb GP.

J Cell Physiol. 2007 Apr;211(1):10-8.

PMID:
17167781
[PubMed - indexed for MEDLINE]
7.

Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets.

Wang XJ, Reyes JL, Chua NH, Gaasterland T.

Genome Biol. 2004;5(9):R65. Epub 2004 Aug 31.

PMID:
15345049
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Identification of homologous microRNAs in 56 animal genomes.

Li SC, Chan WC, Hu LY, Lai CH, Hsu CN, Lin WC.

Genomics. 2010 Jul;96(1):1-9. doi: 10.1016/j.ygeno.2010.03.009. Epub 2010 Mar 27.

PMID:
20347954
[PubMed - indexed for MEDLINE]
Free Article
9.

webFOG: A web tool to map genomic features onto genes.

Tyagi S, Stark MS, Hayward NK, Whiteman DC, Nancarrow DJ.

Biochem Biophys Res Commun. 2010 Oct 22;401(3):447-50. doi: 10.1016/j.bbrc.2010.09.077. Epub 2010 Sep 24.

PMID:
20869951
[PubMed - indexed for MEDLINE]
10.

The colorectal microRNAome.

Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE.

Proc Natl Acad Sci U S A. 2006 Mar 7;103(10):3687-92. Epub 2006 Feb 27.

PMID:
16505370
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Genome-wide analysis of small RNA and novel MicroRNA discovery in human acute lymphoblastic leukemia based on extensive sequencing approach.

Zhang H, Yang JH, Zheng YS, Zhang P, Chen X, Wu J, Xu L, Luo XQ, Ke ZY, Zhou H, Qu LH, Chen YQ.

PLoS One. 2009 Sep 2;4(9):e6849. doi: 10.1371/journal.pone.0006849.

PMID:
19724645
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Computational prediction of microRNA genes in silkworm genome.

Tong CZ, Jin YF, Zhang YZ.

J Zhejiang Univ Sci B. 2006 Oct;7(10):806-16.

PMID:
16972323
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

MicroRNA identification based on sequence and structure alignment.

Wang X, Zhang J, Li F, Gu J, He T, Zhang X, Li Y.

Bioinformatics. 2005 Sep 15;21(18):3610-4. Epub 2005 Jun 30.

PMID:
15994192
[PubMed - indexed for MEDLINE]
Free Article
14.

Identification of plant microRNA homologs.

Dezulian T, Remmert M, Palatnik JF, Weigel D, Huson DH.

Bioinformatics. 2006 Feb 1;22(3):359-60. Epub 2005 Nov 29.

PMID:
16317073
[PubMed - indexed for MEDLINE]
Free Article
15.

TTS mapping: integrative WEB tool for analysis of triplex formation target DNA sequences, G-quadruplets and non-protein coding regulatory DNA elements in the human genome.

Jenjaroenpun P, Kuznetsov VA.

BMC Genomics. 2009 Dec 3;10 Suppl 3:S9. doi: 10.1186/1471-2164-10-S3-S9.

PMID:
19958507
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

miRExpress: analyzing high-throughput sequencing data for profiling microRNA expression.

Wang WC, Lin FM, Chang WC, Lin KY, Huang HD, Lin NS.

BMC Bioinformatics. 2009 Oct 12;10:328. doi: 10.1186/1471-2105-10-328.

PMID:
19821977
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Conservation and divergence of microRNAs in Populus.

Barakat A, Wall PK, Diloreto S, Depamphilis CW, Carlson JE.

BMC Genomics. 2007 Dec 31;8:481. doi: 10.1186/1471-2164-8-481.

PMID:
18166134
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Classification of real and pseudo microRNA precursors using local structure-sequence features and support vector machine.

Xue C, Li F, He T, Liu GP, Li Y, Zhang X.

BMC Bioinformatics. 2005 Dec 29;6:310.

PMID:
16381612
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Computational identification and characteristics of novel microRNAs from the silkworm (Bombyx mori L.).

Huang Y, Zou Q, Tang SM, Wang LG, Shen XJ.

Mol Biol Rep. 2010 Oct;37(7):3171-6. doi: 10.1007/s11033-009-9897-4. Epub 2009 Oct 13.

PMID:
19823945
[PubMed - indexed for MEDLINE]
20.

MicroRNA expression profiles of porcine skeletal muscle.

Zhou B, Liu HL, Shi FX, Wang JY.

Anim Genet. 2010 Oct;41(5):499-508. doi: 10.1111/j.1365-2052.2010.02026.x.

PMID:
20331612
[PubMed - indexed for MEDLINE]

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