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Results: 1 to 20 of 91

1.

The Demosponge Amphimedon queenslandica: Reconstructing the Ancestral Metazoan Genome and Deciphering the Origin of Animal Multicellularity.

Degnan BM, Adamska M, Craigie A, Degnan SM, Fahey B, Gauthier M, Hooper JN, Larroux C, Leys SP, Lovas E, Richards GS.

CSH Protoc. 2008 Dec 1;2008:pdb.emo108. doi: 10.1101/pdb.emo108.

PMID:
21356734
[PubMed]
2.

Wnt and TGF-beta expression in the sponge Amphimedon queenslandica and the origin of metazoan embryonic patterning.

Adamska M, Degnan SM, Green KM, Adamski M, Craigie A, Larroux C, Degnan BM.

PLoS One. 2007 Oct 10;2(10):e1031.

PMID:
17925879
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Transcriptome profiling of the demosponge Amphimedon queenslandica reveals genome-wide events that accompany major life cycle transitions.

Conaco C, Neveu P, Zhou H, Arcila ML, Degnan SM, Degnan BM, Kosik KS.

BMC Genomics. 2012 May 30;13:209.

PMID:
22646746
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The Amphimedon queenslandica genome and the evolution of animal complexity.

Srivastava M, Simakov O, Chapman J, Fahey B, Gauthier ME, Mitros T, Richards GS, Conaco C, Dacre M, Hellsten U, Larroux C, Putnam NH, Stanke M, Adamska M, Darling A, Degnan SM, Oakley TH, Plachetzki DC, Zhai Y, Adamski M, Calcino A, Cummins SF, Goodstein DM, Harris C, Jackson DJ, Leys SP, Shu S, Woodcroft BJ, Vervoort M, Kosik KS, Manning G, Degnan BM, Rokhsar DS.

Nature. 2010 Aug 5;466(7307):720-6. doi: 10.1038/nature09201.

PMID:
20686567
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The genome of the sponge Amphimedon queenslandica provides new perspectives into the origin of Toll-like and interleukin 1 receptor pathways.

Gauthier ME, Du Pasquier L, Degnan BM.

Evol Dev. 2010 Sep-Oct;12(5):519-33. doi: 10.1111/j.1525-142X.2010.00436.x.

PMID:
20883219
[PubMed - indexed for MEDLINE]
6.

Partitioning of genetically distinct cell populations in chimeric juveniles of the sponge Amphimedon queenslandica.

Gauthier M, Degnan BM.

Dev Comp Immunol. 2008;32(11):1270-80. doi: 10.1016/j.dci.2008.04.002. Epub 2008 May 9.

PMID:
18514309
[PubMed - indexed for MEDLINE]
7.

Structure and expression of conserved Wnt pathway components in the demosponge Amphimedon queenslandica.

Adamska M, Larroux C, Adamski M, Green K, Lovas E, Koop D, Richards GS, Zwafink C, Degnan BM.

Evol Dev. 2010 Sep-Oct;12(5):494-518. doi: 10.1111/j.1525-142X.2010.00435.x.

PMID:
20883218
[PubMed - indexed for MEDLINE]
8.

The transcription factor NF-kappaB in the demosponge Amphimedon queenslandica: insights on the evolutionary origin of the Rel homology domain.

Gauthier M, Degnan BM.

Dev Genes Evol. 2008 Jan;218(1):23-32. doi: 10.1007/s00427-007-0197-5. Epub 2008 Jan 4.

PMID:
18175145
[PubMed - indexed for MEDLINE]
9.

Genesis and expansion of metazoan transcription factor gene classes.

Larroux C, Luke GN, Koopman P, Rokhsar DS, Shimeld SM, Degnan BM.

Mol Biol Evol. 2008 May;25(5):980-96. doi: 10.1093/molbev/msn047. Epub 2008 Feb 21.

PMID:
18296413
[PubMed - indexed for MEDLINE]
Free Article
10.

NUMTs in the sponge genome reveal conserved transposition mechanisms in metazoans.

Erpenbeck D, Voigt O, Adamski M, Woodcroft BJ, Hooper JN, Wörheide G, Degnan BM.

Mol Biol Evol. 2011 Jan;28(1):1-5. doi: 10.1093/molbev/msq217. Epub 2010 Aug 18.

PMID:
20720154
[PubMed - indexed for MEDLINE]
Free Article
11.
12.

Evolution of RNA-binding proteins in animals: insights from genome-wide analysis in the sponge Amphimedon queenslandica.

Kerner P, Degnan SM, Marchand L, Degnan BM, Vervoort M.

Mol Biol Evol. 2011 Aug;28(8):2289-303. doi: 10.1093/molbev/msr046. Epub 2011 Feb 15.

PMID:
21325094
[PubMed - indexed for MEDLINE]
Free Article
13.

The initiation of metamorphosis as an ancient polyphenic trait and its role in metazoan life-cycle evolution.

Degnan SM, Degnan BM.

Philos Trans R Soc Lond B Biol Sci. 2010 Feb 27;365(1540):641-51. doi: 10.1098/rstb.2009.0248. Review.

PMID:
20083639
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The evolution of Runx genes II. The C-terminal Groucho recruitment motif is present in both eumetazoans and homoscleromorphs but absent in a haplosclerid demosponge.

Robertson AJ, Larroux C, Degnan BM, Coffman JA.

BMC Res Notes. 2009 Apr 17;2:59. doi: 10.1186/1756-0500-2-59.

PMID:
19374764
[PubMed]
Free PMC Article
15.

Developmental expression of transcription factor genes in a demosponge: insights into the origin of metazoan multicellularity.

Larroux C, Fahey B, Liubicich D, Hinman VF, Gauthier M, Gongora M, Green K, Wörheide G, Leys SP, Degnan BM.

Evol Dev. 2006 Mar-Apr;8(2):150-73.

PMID:
16509894
[PubMed - indexed for MEDLINE]
16.

The analysis of eight transcriptomes from all poriferan classes reveals surprising genetic complexity in sponges.

Riesgo A, Farrar N, Windsor PJ, Giribet G, Leys SP.

Mol Biol Evol. 2014 May;31(5):1102-20. doi: 10.1093/molbev/msu057. Epub 2014 Feb 4.

PMID:
24497032
[PubMed - in process]
17.

A post-synaptic scaffold at the origin of the animal kingdom.

Sakarya O, Armstrong KA, Adamska M, Adamski M, Wang IF, Tidor B, Degnan BM, Oakley TH, Kosik KS.

PLoS One. 2007 Jun 6;2(6):e506.

PMID:
17551586
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Genomic insights into the marine sponge microbiome.

Hentschel U, Piel J, Degnan SM, Taylor MW.

Nat Rev Microbiol. 2012 Sep;10(9):641-54. doi: 10.1038/nrmicro2839. Epub 2012 Jul 30. Review.

PMID:
22842661
[PubMed - indexed for MEDLINE]
19.

The NK homeobox gene cluster predates the origin of Hox genes.

Larroux C, Fahey B, Degnan SM, Adamski M, Rokhsar DS, Degnan BM.

Curr Biol. 2007 Apr 17;17(8):706-10. Epub 2007 Mar 22.

PMID:
17379523
[PubMed - indexed for MEDLINE]
Free Article
20.

Isolation of amphimedon developmental material.

Leys SP, Larroux C, Gauthier M, Adamska M, Fahey B, Richards GS, Degnan SM, Degnan BM.

CSH Protoc. 2008 Dec 1;2008:pdb.prot5095. doi: 10.1101/pdb.prot5095.

PMID:
21356741
[PubMed]

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