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Expression of the Distalless-B gene in Ciona is regulated by a pan-ectodermal enhancer module.

Irvine SQ, Vierra DA, Millette BJ, Blanchette MD, Holbert RE.

Dev Biol. 2011 May 15;353(2):432-9. doi: 10.1016/j.ydbio.2011.02.009. Epub 2011 Feb 19.


Non-overlapping expression patterns of the clustered Dll-A/B genes in the ascidian Ciona intestinalis.

Irvine SQ, Cangiano MC, Millette BJ, Gutter ES.

J Exp Zool B Mol Dev Evol. 2007 Jul 15;308(4):428-41.


Identification and developmental expression of three Distal-less homeobox containing genes in the ascidian Ciona intestinalis.

Caracciolo A, Di Gregorio A, Aniello F, Di Lauro R, Branno M.

Mech Dev. 2000 Dec;99(1-2):173-6.


Genomic structure and functional control of the Dlx3-7 bigene cluster.

Sumiyama K, Irvine SQ, Stock DW, Weiss KM, Kawasaki K, Shimizu N, Shashikant CS, Miller W, Ruddle FH.

Proc Natl Acad Sci U S A. 2002 Jan 22;99(2):780-5. Epub 2002 Jan 15.


Regulation of Dlx3 gene expression in visceral arches by evolutionarily conserved enhancer elements.

Sumiyama K, Ruddle FH.

Proc Natl Acad Sci U S A. 2003 Apr 1;100(7):4030-4. Epub 2003 Mar 17.


Ci-FoxA-a is the earliest zygotic determinant of the ascidian anterior ectoderm and directly activates Ci-sFRP1/5.

Lamy C, Rothbächer U, Caillol D, Lemaire P.

Development. 2006 Aug;133(15):2835-44.


Evolutionary alterations of the minimal promoter for notochord-specific Brachyury expression in ascidian embryos.

Takahashi H, Mitani Y, Satoh G, Satoh N.

Development. 1999 Sep;126(17):3725-34.


A modular cis-regulatory system controls isoform-specific pitx expression in ascidian stomodaeum.

Christiaen L, Bourrat F, Joly JS.

Dev Biol. 2005 Jan 15;277(2):557-66.


Regulatory elements controlling Ci-msxb tissue-specific expression during Ciona intestinalis embryonic development.

Russo MT, Donizetti A, Locascio A, D'Aniello S, Amoroso A, Aniello F, Fucci L, Branno M.

Dev Biol. 2004 Mar 15;267(2):517-28.


Transcriptional regulation of ZicL in the Ciona intestinalis embryo.

Anno C, Satou A, Fujiwara S.

Dev Genes Evol. 2006 Oct;216(10):597-605. Epub 2006 May 17.


Comparative genomics identifies a cis-regulatory module that activates transcription in specific subsets of neurons in Ciona intestinalis larvae.

Yoshida R, Horie T, Tsuda M, Kusakabe TG.

Dev Growth Differ. 2007 Oct;49(8):657-67. Epub 2007 Aug 16.


Epidermal expression of Hox1 is directly activated by retinoic acid in the Ciona intestinalis embryo.

Kanda M, Wada H, Fujiwara S.

Dev Biol. 2009 Nov 15;335(2):454-63. doi: 10.1016/j.ydbio.2009.09.027. Epub 2009 Sep 25.


Computational discovery of DNA motifs associated with cell type-specific gene expression in Ciona.

Kusakabe T, Yoshida R, Ikeda Y, Tsuda M.

Dev Biol. 2004 Dec 15;276(2):563-80. Erratum in: Dev Biol. 2005 Jun 15;282(2):571.


Amphioxus and ascidian Dmbx homeobox genes give clues to the vertebrate origins of midbrain development.

Takahashi T, Holland PW.

Development. 2004 Jul;131(14):3285-94. Epub 2004 Jun 16.


Evolution of anterior Hox regulatory elements among chordates.

Natale A, Sims C, Chiusano ML, Amoroso A, D'Aniello E, Fucci L, Krumlauf R, Branno M, Locascio A.

BMC Evol Biol. 2011 Nov 15;11:330. doi: 10.1186/1471-2148-11-330.

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