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Items: 1 to 20 of 90

1.

The amino acid dipeptide: small but still influential after 50 years.

Hermans J.

Proc Natl Acad Sci U S A. 2011 Feb 22;108(8):3095-6. doi: 10.1073/pnas.1019470108. Epub 2011 Feb 10. No abstract available.

2.

A molecular dynamics study of Cyclophilin A free and in complex with the Ala-Pro dipeptide.

Mark P, Nilsson L.

Eur Biophys J. 2007 Mar;36(3):213-24. Epub 2007 Jan 16.

PMID:
17225137
3.

Structures of dipeptides: the head-to-tail story.

Görbitz CH.

Acta Crystallogr B. 2010 Feb;66(Pt 1):84-93. doi: 10.1107/S0108768109053257. Epub 2010 Jan 22.

PMID:
20101088
4.

Log-linear modelling of protein dipeptide structure reveals interesting patterns of side-chain-backbone interactions.

Hommola K, Gilks WR, Mardia KV.

Stat Appl Genet Mol Biol. 2011;10:Article 8. doi: 10.2202/1544-6115.1579. Epub 2011 Jan 25.

PMID:
21291418
5.

Energetics of oxo- and thio-dipeptide formation via amino acid condensation: a systematic computational analysis.

Torsello M, Orian L, De Zotti M, Saini R, Formaggio F, Polimeno A.

Phys Chem Chem Phys. 2014 Sep 7;16(33):17515-22. doi: 10.1039/c4cp02680b.

PMID:
25023568
6.

Towards a density functional treatment of chemical reactions in complex media.

Berard DR, Wei D, Salahub DR.

Pac Symp Biocomput. 1997:51-61.

7.
8.

Multiple state transition interface sampling of alanine dipeptide in explicit solvent.

Du WN, Marino KA, Bolhuis PG.

J Chem Phys. 2011 Oct 14;135(14):145102. doi: 10.1063/1.3644344.

PMID:
22010733
9.
10.

Mechanistic implication of crystal structures of the cyclophilin-dipeptide complexes.

Zhao Y, Ke H.

Biochemistry. 1996 Jun 11;35(23):7362-8.

PMID:
8652512
11.

A shape-persistent D,L-dipeptide building block for the assembly of rigidified oligopeptides.

Hörger R, Geyer A.

Org Biomol Chem. 2006 Dec 21;4(24):4491-6. Epub 2006 Nov 9.

PMID:
17268645
12.

Reconstructing the equilibrium Boltzmann distribution from well-tempered metadynamics.

Bonomi M, Barducci A, Parrinello M.

J Comput Chem. 2009 Aug;30(11):1615-21. doi: 10.1002/jcc.21305.

PMID:
19421997
13.

Extensive conformational searches of 13 representative dipeptides and an efficient method for dipeptide structure determinations based on amino acid conformers.

Yu W, Xu X, Li H, Pang R, Fang K, Lin Z.

J Comput Chem. 2009 Oct;30(13):2105-21. doi: 10.1002/jcc.21211.

PMID:
19242963
14.

Design and synthesis of a new bicyclic dipeptide isostere.

Cordero FM, Valenza S, Machetti F, Brandi A.

Chem Commun (Camb). 2001 Sep 7;(17):1590-1.

PMID:
12240396
15.

The low energy tautomers and conformers of the dipeptides HisGly and GlyHis and of their sodium ion complexes in the gas phase.

Kapota C, Ohanessian G.

Phys Chem Chem Phys. 2005 Nov 7;7(21):3744-55. Epub 2005 Sep 9.

PMID:
16358024
16.

[Conformational states of cyclic dipeptides with lactam bond between omega-functions of lysine and aspartic or glutamic acid residues].

Kostetskiĭ PV, Arkhipova SF, Artem'ev IV, Rodionov IL, Rodionova LN, Ivanov VT.

Bioorg Khim. 1997 Jul;23(7):531-8. Russian.

PMID:
9471972
17.

[Influence of amino acid and dipeptide composition on protein stability of piezophilic microbes].

Zhang G, Li H, Gao J, Fang B.

Wei Sheng Wu Xue Bao. 2009 Feb;49(2):198-203. Chinese.

PMID:
19445175
18.

Crystal structure of the dipeptide cyclo(glycyl-l-glutamine).

Caira MR, Buyukbingol E, Adejare A, Millington WR.

Anal Sci. 2002 Oct;18(10):1175-6. No abstract available.

19.

X-ray crystal structure of a dipeptide-chymotrypsin complex in an inhibitory interaction.

Kashima A, Inoue Y, Sugio S, Maeda I, Nose T, Shimohigashi Y.

Eur J Biochem. 1998 Jul 1;255(1):12-23.

20.

Accelerating the replica exchange method through an efficient all-pairs exchange.

Brenner P, Sweet CR, VonHandorf D, Izaguirre JA.

J Chem Phys. 2007 Feb 21;126(7):074103.

PMID:
17328589
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