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Results: 1 to 20 of 162

1.

The development of metabolomic sampling procedures for Pichia pastoris, and baseline metabolome data.

Tredwell GD, Edwards-Jones B, Leak DJ, Bundy JG.

PLoS One. 2011 Jan 21;6(1):e16286. doi: 10.1371/journal.pone.0016286.

PMID:
21283710
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Glucose-methanol co-utilization in Pichia pastoris studied by metabolomics and instationary ¹³C flux analysis.

Jordà J, Suarez C, Carnicer M, ten Pierick A, Heijnen JJ, van Gulik W, Ferrer P, Albiol J, Wahl A.

BMC Syst Biol. 2013 Feb 28;7:17. doi: 10.1186/1752-0509-7-17.

PMID:
23448228
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Development of quantitative metabolomics for Pichia pastoris.

Carnicer M, Canelas AB, Ten Pierick A, Zeng Z, van Dam J, Albiol J, Ferrer P, Heijnen JJ, van Gulik W.

Metabolomics. 2012 Apr;8(2):284-298. Epub 2011 Apr 21.

PMID:
22448155
[PubMed]
Free PMC Article
4.

Evaluation of sampling and extraction methodologies for the global metabolic profiling of Saccharophagus degradans.

Shin MH, Lee do Y, Liu KH, Fiehn O, Kim KH.

Anal Chem. 2010 Aug 1;82(15):6660-6. doi: 10.1021/ac1012656.

PMID:
20669998
[PubMed - indexed for MEDLINE]
5.

Assessment of sampling strategies for gas chromatography-mass spectrometry (GC-MS) based metabolomics of cyanobacteria.

Krall L, Huege J, Catchpole G, Steinhauser D, Willmitzer L.

J Chromatogr B Analyt Technol Biomed Life Sci. 2009 Oct 1;877(27):2952-60. doi: 10.1016/j.jchromb.2009.07.006. Epub 2009 Jul 10.

PMID:
19631594
[PubMed - indexed for MEDLINE]
6.

Metabolite extraction from suspension-cultured mammalian cells for global metabolite profiling.

Sellick CA, Hansen R, Stephens GM, Goodacre R, Dickson AJ.

Nat Protoc. 2011 Jul 28;6(8):1241-9. doi: 10.1038/nprot.2011.366.

PMID:
21799492
[PubMed - indexed for MEDLINE]
7.

A protocol for the investigation of the intracellular Staphylococcus aureus metabolome.

Meyer H, Liebeke M, Lalk M.

Anal Biochem. 2010 Jun 15;401(2):250-9. doi: 10.1016/j.ab.2010.03.003. Epub 2010 Mar 6.

PMID:
20211591
[PubMed - indexed for MEDLINE]
8.

Development and optimization of a metabolomic method for analysis of adherent cell cultures.

Danielsson AP, Moritz T, Mulder H, Spégel P.

Anal Biochem. 2010 Sep 1;404(1):30-9. doi: 10.1016/j.ab.2010.04.013. Epub 2010 Apr 22.

PMID:
20417172
[PubMed - indexed for MEDLINE]
9.

Evaluation and optimization of metabolome sample preparation methods for Saccharomyces cerevisiae.

Kim S, Lee do Y, Wohlgemuth G, Park HS, Fiehn O, Kim KH.

Anal Chem. 2013 Feb 19;85(4):2169-76. doi: 10.1021/ac302881e. Epub 2013 Jan 25.

PMID:
23289506
[PubMed - indexed for MEDLINE]
10.

1H NMR, GC-EI-TOFMS, and data set correlation for fruit metabolomics: application to spatial metabolite analysis in melon.

Biais B, Allwood JW, Deborde C, Xu Y, Maucourt M, Beauvoit B, Dunn WB, Jacob D, Goodacre R, Rolin D, Moing A.

Anal Chem. 2009 Apr 15;81(8):2884-94. doi: 10.1021/ac9001996.

PMID:
19298059
[PubMed - indexed for MEDLINE]
11.

Quantitative evaluation of intracellular metabolite extraction techniques for yeast metabolomics.

Canelas AB, ten Pierick A, Ras C, Seifar RM, van Dam JC, van Gulik WM, Heijnen JJ.

Anal Chem. 2009 Sep 1;81(17):7379-89. doi: 10.1021/ac900999t.

PMID:
19653633
[PubMed - indexed for MEDLINE]
12.

Interlaboratory comparison for quantitative primary metabolite profiling in Pichia pastoris.

Klavins K, Neubauer S, Al Chalabi A, Sonntag D, Haberhauer-Troyer C, Russmayer H, Sauer M, Mattanovich D, Hann S, Koellensperger G.

Anal Bioanal Chem. 2013 Jun;405(15):5159-69. doi: 10.1007/s00216-013-6964-4. Epub 2013 Apr 19.

PMID:
23604417
[PubMed - indexed for MEDLINE]
13.

Metabolic flux profiling of recombinant protein secreting Pichia pastoris growing on glucose:methanol mixtures.

Jordà J, Jouhten P, Cámara E, Maaheimo H, Albiol J, Ferrer P.

Microb Cell Fact. 2012 May 8;11:57. doi: 10.1186/1475-2859-11-57.

PMID:
22569166
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Fit-for-purpose quenching and extraction protocols for metabolic profiling of yeast using chromatography-mass spectrometry platforms.

Winder CL, Dunn WB.

Methods Mol Biol. 2011;759:225-38. doi: 10.1007/978-1-61779-173-4_14.

PMID:
21863491
[PubMed - indexed for MEDLINE]
15.

Cross-platform comparison of Caenorhabditis elegans tissue extraction strategies for comprehensive metabolome coverage.

Geier FM, Want EJ, Leroi AM, Bundy JG.

Anal Chem. 2011 May 15;83(10):3730-6. doi: 10.1021/ac2001109. Epub 2011 Apr 21.

PMID:
21480661
[PubMed - indexed for MEDLINE]
16.

An untargeted multi-technique metabolomics approach to studying intracellular metabolites of HepG2 cells exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin.

Ruiz-Aracama A, Peijnenburg A, Kleinjans J, Jennen D, van Delft J, Hellfrisch C, Lommen A.

BMC Genomics. 2011 May 20;12:251. doi: 10.1186/1471-2164-12-251.

PMID:
21599895
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Global metabolic profiling of Escherichia coli cultures: an evaluation of methods for quenching and extraction of intracellular metabolites.

Winder CL, Dunn WB, Schuler S, Broadhurst D, Jarvis R, Stephens GM, Goodacre R.

Anal Chem. 2008 Apr 15;80(8):2939-48. doi: 10.1021/ac7023409. Epub 2008 Mar 11.

PMID:
18331064
[PubMed - indexed for MEDLINE]
18.

Analytical platform for metabolome analysis of microbial cells using methyl chloroformate derivatization followed by gas chromatography-mass spectrometry.

Smart KF, Aggio RB, Van Houtte JR, Villas-Bôas SG.

Nat Protoc. 2010 Sep;5(10):1709-29. doi: 10.1038/nprot.2010.108. Epub 2010 Sep 30.

PMID:
20885382
[PubMed - indexed for MEDLINE]
19.

Different-batch metabolome analysis of Saccharomyces cerevisiae based on gas chromatography/mass spectrometry.

Kawase N, Tsugawa H, Bamba T, Fukusaki E.

J Biosci Bioeng. 2014 Feb;117(2):248-55. doi: 10.1016/j.jbiosc.2013.07.008. Epub 2013 Aug 19.

PMID:
23968869
[PubMed - indexed for MEDLINE]
20.

High-throughput quantitative metabolomics: workflow for cultivation, quenching, and analysis of yeast in a multiwell format.

Ewald JC, Heux S, Zamboni N.

Anal Chem. 2009 May 1;81(9):3623-9. doi: 10.1021/ac900002u.

PMID:
19320491
[PubMed - indexed for MEDLINE]

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