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Results: 1 to 20 of 106

1.

Less label, more free: approaches in label-free quantitative mass spectrometry.

Neilson KA, Ali NA, Muralidharan S, Mirzaei M, Mariani M, Assadourian G, Lee A, van Sluyter SC, Haynes PA.

Proteomics. 2011 Feb;11(4):535-53. doi: 10.1002/pmic.201000553. Epub 2011 Jan 17. Review.

PMID:
21243637
[PubMed - indexed for MEDLINE]
2.

An overview of label-free quantitation methods in proteomics by mass spectrometry.

Wong JW, Cagney G.

Methods Mol Biol. 2010;604:273-83. doi: 10.1007/978-1-60761-444-9_18.

PMID:
20013377
[PubMed - indexed for MEDLINE]
3.

ProtQuant: a tool for the label-free quantification of MudPIT proteomics data.

Bridges SM, Magee GB, Wang N, Williams WP, Burgess SC, Nanduri B.

BMC Bioinformatics. 2007 Nov 1;8 Suppl 7:S24.

PMID:
18047724
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Relative, label-free protein quantitation: spectral counting error statistics from nine replicate MudPIT samples.

Cooper B, Feng J, Garrett WM.

J Am Soc Mass Spectrom. 2010 Sep;21(9):1534-46. doi: 10.1016/j.jasms.2010.05.001. Epub 2010 May 6.

PMID:
20541435
[PubMed - indexed for MEDLINE]
Free Article
5.

Phosphoproteomics by mass spectrometry and classical protein chemistry approaches.

Salih E.

Mass Spectrom Rev. 2005 Nov-Dec;24(6):828-46. Review.

PMID:
15538747
[PubMed - indexed for MEDLINE]
6.

Role of spectral counting in quantitative proteomics.

Lundgren DH, Hwang SI, Wu L, Han DK.

Expert Rev Proteomics. 2010 Feb;7(1):39-53. doi: 10.1586/epr.09.69. Review.

PMID:
20121475
[PubMed - indexed for MEDLINE]
7.

Mass spectrometry-based label-free quantitative proteomics.

Zhu W, Smith JW, Huang CM.

J Biomed Biotechnol. 2010;2010:840518. doi: 10.1155/2010/840518. Epub 2009 Nov 10. Review.

PMID:
19911078
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Computational methods for the comparative quantification of proteins in label-free LCn-MS experiments.

Wong JW, Sullivan MJ, Cagney G.

Brief Bioinform. 2008 Mar;9(2):156-65. Epub 2007 Sep 28. Review.

PMID:
17905794
[PubMed - indexed for MEDLINE]
Free Article
9.

Proteomics by mass spectrometry: approaches, advances, and applications.

Yates JR, Ruse CI, Nakorchevsky A.

Annu Rev Biomed Eng. 2009;11:49-79. doi: 10.1146/annurev-bioeng-061008-124934. Review.

PMID:
19400705
[PubMed - indexed for MEDLINE]
10.

Semi-supervised LC/MS alignment for differential proteomics.

Fischer B, Grossmann J, Roth V, Gruissem W, Baginsky S, Buhmann JM.

Bioinformatics. 2006 Jul 15;22(14):e132-40.

PMID:
16873463
[PubMed - indexed for MEDLINE]
Free Article
11.

Label-free quantitation, an extension to 2DB.

Allmer J.

Amino Acids. 2010 Apr;38(4):1075-87. doi: 10.1007/s00726-009-0317-9. Epub 2009 Jul 3.

PMID:
19575279
[PubMed - indexed for MEDLINE]
12.

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.

Brusniak MY, Bodenmiller B, Campbell D, Cooke K, Eddes J, Garbutt A, Lau H, Letarte S, Mueller LN, Sharma V, Vitek O, Zhang N, Aebersold R, Watts JD.

BMC Bioinformatics. 2008 Dec 16;9:542. doi: 10.1186/1471-2105-9-542.

PMID:
19087345
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Design and analysis of quantitative differential proteomics investigations using LC-MS technology.

Bukhman YV, Dharsee M, Ewing R, Chu P, Topaloglou T, Le Bihan T, Goh T, Duewel H, Stewart II, Wisniewski JR, Ng NF.

J Bioinform Comput Biol. 2008 Feb;6(1):107-23.

PMID:
18324749
[PubMed - indexed for MEDLINE]
14.

Label-free mass spectrometry-based protein quantification technologies in proteomic analysis.

Wang M, You J, Bemis KG, Tegeler TJ, Brown DP.

Brief Funct Genomic Proteomic. 2008 Sep;7(5):329-39. doi: 10.1093/bfgp/eln031. Epub 2008 Jun 25.

PMID:
18579615
[PubMed - indexed for MEDLINE]
Free Article
15.

To label or not to label: applications of quantitative proteomics in neuroscience research.

Filiou MD, Martins-de-Souza D, Guest PC, Bahn S, Turck CW.

Proteomics. 2012 Feb;12(4-5):736-47. doi: 10.1002/pmic.201100350. Epub 2012 Jan 23. Review.

PMID:
22247077
[PubMed - indexed for MEDLINE]
16.

Advancements in plant proteomics using quantitative mass spectrometry.

Oeljeklaus S, Meyer HE, Warscheid B.

J Proteomics. 2009 Apr 13;72(3):545-54. doi: 10.1016/j.jprot.2008.11.008. Epub 2008 Nov 18. Review.

PMID:
19049910
[PubMed - indexed for MEDLINE]
17.

Proteomics by FTICR mass spectrometry: top down and bottom up.

Bogdanov B, Smith RD.

Mass Spectrom Rev. 2005 Mar-Apr;24(2):168-200. Review.

PMID:
15389855
[PubMed - indexed for MEDLINE]
18.

Current challenges in software solutions for mass spectrometry-based quantitative proteomics.

Cappadona S, Baker PR, Cutillas PR, Heck AJ, van Breukelen B.

Amino Acids. 2012 Sep;43(3):1087-108. doi: 10.1007/s00726-012-1289-8. Epub 2012 Jul 22. Review.

PMID:
22821268
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Validation of gel-free, label-free quantitative proteomics approaches: applications for seed allergen profiling.

Stevenson SE, Chu Y, Ozias-Akins P, Thelen JJ.

J Proteomics. 2009 Apr 13;72(3):555-66. doi: 10.1016/j.jprot.2008.11.005. Epub 2008 Nov 18.

PMID:
19049836
[PubMed - indexed for MEDLINE]
20.

IDEAL-Q, an automated tool for label-free quantitation analysis using an efficient peptide alignment approach and spectral data validation.

Tsou CC, Tsai CF, Tsui YH, Sudhir PR, Wang YT, Chen YJ, Chen JY, Sung TY, Hsu WL.

Mol Cell Proteomics. 2010 Jan;9(1):131-44. doi: 10.1074/mcp.M900177-MCP200. Epub 2009 Sep 13.

PMID:
19752006
[PubMed - indexed for MEDLINE]
Free PMC Article

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