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Results: 1 to 20 of 102

1.

The role of exon shuffling in shaping protein-protein interaction networks.

Cancherini DV, França GS, de Souza SJ.

BMC Genomics. 2010 Dec 22;11 Suppl 5:S11. doi: 10.1186/1471-2164-11-S5-S11.

PMID:
21210967
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Evolutionary history of exon shuffling.

França GS, Cancherini DV, de Souza SJ.

Genetica. 2012 Jun;140(4-6):249-57. Epub 2012 Sep 5.

PMID:
22948334
[PubMed - indexed for MEDLINE]
3.

Protein domains correlate strongly with exons in multiple eukaryotic genomes--evidence of exon shuffling?

Liu M, Grigoriev A.

Trends Genet. 2004 Sep;20(9):399-403. Review.

PMID:
15313546
[PubMed - indexed for MEDLINE]
4.

Origin of new genes: evidence from experimental and computational analyses.

Long M, Deutsch M, Wang W, Betrán E, Brunet FG, Zhang J.

Genetica. 2003 Jul;118(2-3):171-82. Review.

PMID:
12868607
[PubMed - indexed for MEDLINE]
5.

Signatures of domain shuffling in the human genome.

Kaessmann H, Zöllner S, Nekrutenko A, Li WH.

Genome Res. 2002 Nov;12(11):1642-50.

PMID:
12421750
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

ExDom: an integrated database for comparative analysis of the exon-intron structures of protein domains in eukaryotes.

Bhasi A, Philip P, Manikandan V, Senapathy P.

Nucleic Acids Res. 2009 Jan;37(Database issue):D703-11. doi: 10.1093/nar/gkn746. Epub 2008 Nov 4.

PMID:
18984624
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The rarity of gene shuffling in conserved genes.

Conant GC, Wagner A.

Genome Biol. 2005;6(6):R50. Epub 2005 May 9.

PMID:
15960802
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Modeling protein network evolution under genome duplication and domain shuffling.

Evlampiev K, Isambert H.

BMC Syst Biol. 2007 Nov 13;1:49.

PMID:
17999763
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Significant expansion of exon-bordering protein domains during animal proteome evolution.

Liu M, Walch H, Wu S, Grigoriev A.

Nucleic Acids Res. 2005 Jan 7;33(1):95-105. Print 2005.

PMID:
15640447
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Directed evolution of proteins by exon shuffling.

Kolkman JA, Stemmer WP.

Nat Biotechnol. 2001 May;19(5):423-8. Review.

PMID:
11329010
[PubMed - indexed for MEDLINE]
11.

Signs of ancient and modern exon-shuffling are correlated to the distribution of ancient and modern domains along proteins.

Vibranovski MD, Sakabe NJ, de Oliveira RS, de Souza SJ.

J Mol Evol. 2005 Sep;61(3):341-50. Epub 2005 Jul 18.

PMID:
16034650
[PubMed - indexed for MEDLINE]
12.

Evolutionary cores of domain co-occurrence networks.

Wuchty S, Almaas E.

BMC Evol Biol. 2005 Mar 23;5:24.

PMID:
15788102
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Genome evolution and the evolution of exon-shuffling--a review.

Patthy L.

Gene. 1999 Sep 30;238(1):103-14. Review.

PMID:
10570989
[PubMed - indexed for MEDLINE]
14.

Gene expansion and retention leads to a diverse tyrosine kinase superfamily in amphioxus.

D'Aniello S, Irimia M, Maeso I, Pascual-Anaya J, Jiménez-Delgado S, Bertrand S, Garcia-Fernàndez J.

Mol Biol Evol. 2008 Sep;25(9):1841-54. doi: 10.1093/molbev/msn132. Epub 2008 Jun 11.

PMID:
18550616
[PubMed - indexed for MEDLINE]
Free Article
15.

Intron-dependent evolution: preferred types of exons and introns.

Patthy L.

FEBS Lett. 1987 Apr 6;214(1):1-7. Review.

PMID:
3552723
[PubMed - indexed for MEDLINE]
Free Article
16.

Exon shuffling and other ways of module exchange.

Patthy L.

Matrix Biol. 1996 Nov;15(5):301-10; discussion 311-2. Review.

PMID:
8981326
[PubMed - indexed for MEDLINE]
17.

Inferring homologous protein-protein interactions through pair position specific scoring matrix.

Lin CY, Chen YC, Lo YS, Yang JM.

BMC Bioinformatics. 2013;14 Suppl 2:S11. doi: 10.1186/1471-2105-14-S2-S11. Epub 2013 Jan 21.

PMID:
23367879
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Intron-exon structures of eukaryotic model organisms.

Deutsch M, Long M.

Nucleic Acids Res. 1999 Aug 1;27(15):3219-28.

PMID:
10454621
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Intron phase correlations and the evolution of the intron/exon structure of genes.

Long M, Rosenberg C, Gilbert W.

Proc Natl Acad Sci U S A. 1995 Dec 19;92(26):12495-9.

PMID:
8618928
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

The metazoan history of the COE transcription factors. Selection of a variant HLH motif by mandatory inclusion of a duplicated exon in vertebrates.

Daburon V, Mella S, Plouhinec JL, Mazan S, Crozatier M, Vincent A.

BMC Evol Biol. 2008 May 2;8:131. doi: 10.1186/1471-2148-8-131.

PMID:
18454855
[PubMed - indexed for MEDLINE]
Free PMC Article

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