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Items: 1 to 20 of 768

1.

A garter snake transcriptome: pyrosequencing, de novo assembly, and sex-specific differences.

Schwartz TS, Tae H, Yang Y, Mockaitis K, Van Hemert JL, Proulx SR, Choi JH, Bronikowski AM.

BMC Genomics. 2010 Dec 7;11:694. doi: 10.1186/1471-2164-11-694.

2.

Comparative high-throughput transcriptome sequencing and development of SiESTa, the Silene EST annotation database.

Blavet N, Charif D, Oger-Desfeux C, Marais GA, Widmer A.

BMC Genomics. 2011 Jul 26;12:376. doi: 10.1186/1471-2164-12-376.

3.

Sequencing and characterization of the guppy (Poecilia reticulata) transcriptome.

Fraser BA, Weadick CJ, Janowitz I, Rodd FH, Hughes KA.

BMC Genomics. 2011 Apr 20;12:202. doi: 10.1186/1471-2164-12-202.

4.

De novo sequence assembly and characterization of Lycoris aurea transcriptome using GS FLX titanium platform of 454 pyrosequencing.

Wang R, Xu S, Jiang Y, Jiang J, Li X, Liang L, He J, Peng F, Xia B.

PLoS One. 2013 Apr 9;8(4):e60449. doi: 10.1371/journal.pone.0060449. Print 2013.

5.
6.

High-throughput sequencing and analysis of the gill tissue transcriptome from the deep-sea hydrothermal vent mussel Bathymodiolus azoricus.

Bettencourt R, Pinheiro M, Egas C, Gomes P, Afonso M, Shank T, Santos RS.

BMC Genomics. 2010 Oct 11;11:559. doi: 10.1186/1471-2164-11-559.

7.

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.

Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, Zhang J, Jiang Y, Zhang H, Wang X, Rajendran KV, Khoo L, Kucuktas H, Peatman E, Liu Z.

BMC Genomics. 2012 Nov 5;13:595. doi: 10.1186/1471-2164-13-595.

8.

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches.

Salem M, Rexroad CE 3rd, Wang J, Thorgaard GH, Yao J.

BMC Genomics. 2010 Oct 13;11:564. doi: 10.1186/1471-2164-11-564.

9.

Gene discovery and tissue-specific transcriptome analysis in chickpea with massively parallel pyrosequencing and web resource development.

Garg R, Patel RK, Jhanwar S, Priya P, Bhattacharjee A, Yadav G, Bhatia S, Chattopadhyay D, Tyagi AK, Jain M.

Plant Physiol. 2011 Aug;156(4):1661-78. doi: 10.1104/pp.111.178616. Epub 2011 Jun 8.

10.

Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems.

Yang SS, Tu ZJ, Cheung F, Xu WW, Lamb JF, Jung HJ, Vance CP, Gronwald JW.

BMC Genomics. 2011 Apr 19;12:199. doi: 10.1186/1471-2164-12-199.

11.

Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak.

Ueno S, Le Provost G, Léger V, Klopp C, Noirot C, Frigerio JM, Salin F, Salse J, Abrouk M, Murat F, Brendel O, Derory J, Abadie P, Léger P, Cabane C, Barré A, de Daruvar A, Couloux A, Wincker P, Reviron MP, Kremer A, Plomion C.

BMC Genomics. 2010 Nov 23;11:650. doi: 10.1186/1471-2164-11-650.

12.

Heart transcriptome of the bank vole (Myodes glareolus): towards understanding the evolutionary variation in metabolic rate.

Babik W, Stuglik M, Qi W, Kuenzli M, Kuduk K, Koteja P, Radwan J.

BMC Genomics. 2010 Jun 21;11:390. doi: 10.1186/1471-2164-11-390.

13.

The first insight into the tissue specific taxus transcriptome via Illumina second generation sequencing.

Hao da C, Ge G, Xiao P, Zhang Y, Yang L.

PLoS One. 2011;6(6):e21220. doi: 10.1371/journal.pone.0021220. Epub 2011 Jun 22.

14.

De novo assembly and characterization of the Barnyardgrass (Echinochloa crus-galli) transcriptome using next-generation pyrosequencing.

Yang X, Yu XY, Li YF.

PLoS One. 2013 Jul 10;8(7):e69168. doi: 10.1371/journal.pone.0069168. Print 2013.

15.

Transcriptome deep-sequencing and clustering of expressed isoforms from Favia corals.

Pooyaei Mehr SF, DeSalle R, Kao HT, Narechania A, Han Z, Tchernov D, Pieribone V, Gruber DF.

BMC Genomics. 2013 Aug 12;14:546. doi: 10.1186/1471-2164-14-546.

16.

Rapid transcriptome characterization and parsing of sequences in a non-model host-pathogen interaction; pea-Sclerotinia sclerotiorum.

Zhuang X, McPhee KE, Coram TE, Peever TL, Chilvers MI.

BMC Genomics. 2012 Nov 26;13:668. doi: 10.1186/1471-2164-13-668.

17.

Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types.

Guo S, Zheng Y, Joung JG, Liu S, Zhang Z, Crasta OR, Sobral BW, Xu Y, Huang S, Fei Z.

BMC Genomics. 2010 Jun 17;11:384. doi: 10.1186/1471-2164-11-384.

18.

Characterization of Oncidium 'Gower Ramsey' transcriptomes using 454 GS-FLX pyrosequencing and their application to the identification of genes associated with flowering time.

Chang YY, Chu YW, Chen CW, Leu WM, Hsu HF, Yang CH.

Plant Cell Physiol. 2011 Sep;52(9):1532-45. doi: 10.1093/pcp/pcr101. Epub 2011 Jul 23.

PMID:
21785129
19.

Genome reannotation of the lizard Anolis carolinensis based on 14 adult and embryonic deep transcriptomes.

Eckalbar WL, Hutchins ED, Markov GJ, Allen AN, Corneveaux JJ, Lindblad-Toh K, Di Palma F, Alföldi J, Huentelman MJ, Kusumi K.

BMC Genomics. 2013 Jan 23;14:49. doi: 10.1186/1471-2164-14-49.

20.

De novo sequence assembly and characterisation of a partial transcriptome for an evolutionarily distinct reptile, the tuatara (Sphenodon punctatus).

Miller HC, Biggs PJ, Voelckel C, Nelson NJ.

BMC Genomics. 2012 Aug 31;13:439. doi: 10.1186/1471-2164-13-439.

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