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1.

The BioGRID Interaction Database: 2011 update.

Stark C, Breitkreutz BJ, Chatr-Aryamontri A, Boucher L, Oughtred R, Livstone MS, Nixon J, Van Auken K, Wang X, Shi X, Reguly T, Rust JM, Winter A, Dolinski K, Tyers M.

Nucleic Acids Res. 2011 Jan;39(Database issue):D698-704. doi: 10.1093/nar/gkq1116. Epub 2010 Nov 11.

2.

The BioGRID Interaction Database: 2008 update.

Breitkreutz BJ, Stark C, Reguly T, Boucher L, Breitkreutz A, Livstone M, Oughtred R, Lackner DH, Bähler J, Wood V, Dolinski K, Tyers M.

Nucleic Acids Res. 2008 Jan;36(Database issue):D637-40. Epub 2007 Nov 13.

3.

The BioGRID interaction database: 2013 update.

Chatr-Aryamontri A, Breitkreutz BJ, Heinicke S, Boucher L, Winter A, Stark C, Nixon J, Ramage L, Kolas N, O'Donnell L, Reguly T, Breitkreutz A, Sellam A, Chen D, Chang C, Rust J, Livstone M, Oughtred R, Dolinski K, Tyers M.

Nucleic Acids Res. 2013 Jan;41(Database issue):D816-23. doi: 10.1093/nar/gks1158. Epub 2012 Nov 30.

4.

BioGRID: a general repository for interaction datasets.

Stark C, Breitkreutz BJ, Reguly T, Boucher L, Breitkreutz A, Tyers M.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D535-9.

5.

The BioGRID interaction database: 2015 update.

Chatr-Aryamontri A, Breitkreutz BJ, Oughtred R, Boucher L, Heinicke S, Chen D, Stark C, Breitkreutz A, Kolas N, O'Donnell L, Reguly T, Nixon J, Ramage L, Winter A, Sellam A, Chang C, Hirschman J, Theesfeld C, Rust J, Livstone MS, Dolinski K, Tyers M.

Nucleic Acids Res. 2015 Jan;43(Database issue):D470-8. doi: 10.1093/nar/gku1204. Epub 2014 Nov 26.

6.

Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae.

Reguly T, Breitkreutz A, Boucher L, Breitkreutz BJ, Hon GC, Myers CL, Parsons A, Friesen H, Oughtred R, Tong A, Stark C, Ho Y, Botstein D, Andrews B, Boone C, Troyanskya OG, Ideker T, Dolinski K, Batada NN, Tyers M.

J Biol. 2006;5(4):11. Epub 2006 Jun 8.

7.

BioGRID REST Service, BiogridPlugin2 and BioGRID WebGraph: new tools for access to interaction data at BioGRID.

Winter AG, Wildenhain J, Tyers M.

Bioinformatics. 2011 Apr 1;27(7):1043-4. doi: 10.1093/bioinformatics/btr062. Epub 2011 Feb 7.

8.

ConsensusPathDB: toward a more complete picture of cell biology.

Kamburov A, Pentchev K, Galicka H, Wierling C, Lehrach H, Herwig R.

Nucleic Acids Res. 2011 Jan;39(Database issue):D712-7. doi: 10.1093/nar/gkq1156. Epub 2010 Nov 11.

9.

IntPath--an integrated pathway gene relationship database for model organisms and important pathogens.

Zhou H, Jin J, Zhang H, Yi B, Wozniak M, Wong L.

BMC Syst Biol. 2012;6 Suppl 2:S2. doi: 10.1186/1752-0509-6-S2-S2. Epub 2012 Dec 12.

10.

YeastMine--an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit.

Balakrishnan R, Park J, Karra K, Hitz BC, Binkley G, Hong EL, Sullivan J, Micklem G, Cherry JM.

Database (Oxford). 2012 Mar 20;2012:bar062. doi: 10.1093/database/bar062. Print 2012.

11.

DroID: the Drosophila Interactions Database, a comprehensive resource for annotated gene and protein interactions.

Yu J, Pacifico S, Liu G, Finley RL Jr.

BMC Genomics. 2008 Oct 7;9:461. doi: 10.1186/1471-2164-9-461.

12.

yMGV: a cross-species expression data mining tool.

Lelandais G, Le Crom S, Devaux F, Vialette S, Church GM, Jacq C, Marc P.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D323-5.

13.

A database and tool, IM Browser, for exploring and integrating emerging gene and protein interaction data for Drosophila.

Pacifico S, Liu G, Guest S, Parrish JR, Fotouhi F, Finley RL Jr.

BMC Bioinformatics. 2006 Apr 7;7:195.

14.

DroID 2011: a comprehensive, integrated resource for protein, transcription factor, RNA and gene interactions for Drosophila.

Murali T, Pacifico S, Yu J, Guest S, Roberts GG 3rd, Finley RL Jr.

Nucleic Acids Res. 2011 Jan;39(Database issue):D736-43. doi: 10.1093/nar/gkq1092. Epub 2010 Oct 29.

15.

AtPID: Arabidopsis thaliana protein interactome database--an integrative platform for plant systems biology.

Cui J, Li P, Li G, Xu F, Zhao C, Li Y, Yang Z, Wang G, Yu Q, Li Y, Shi T.

Nucleic Acids Res. 2008 Jan;36(Database issue):D999-1008. Epub 2007 Oct 25.

16.

PomBase: a comprehensive online resource for fission yeast.

Wood V, Harris MA, McDowall MD, Rutherford K, Vaughan BW, Staines DM, Aslett M, Lock A, Bähler J, Kersey PJ, Oliver SG.

Nucleic Acids Res. 2012 Jan;40(Database issue):D695-9. doi: 10.1093/nar/gkr853. Epub 2011 Oct 28.

17.

The IntAct molecular interaction database in 2012.

Kerrien S, Aranda B, Breuza L, Bridge A, Broackes-Carter F, Chen C, Duesbury M, Dumousseau M, Feuermann M, Hinz U, Jandrasits C, Jimenez RC, Khadake J, Mahadevan U, Masson P, Pedruzzi I, Pfeiffenberger E, Porras P, Raghunath A, Roechert B, Orchard S, Hermjakob H.

Nucleic Acids Res. 2012 Jan;40(Database issue):D841-6. doi: 10.1093/nar/gkr1088. Epub 2011 Nov 24.

18.

YOGY: a web-based, integrated database to retrieve protein orthologs and associated Gene Ontology terms.

Penkett CJ, Morris JA, Wood V, Bähler J.

Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W330-4.

19.

The GRID: The General Repository for Interaction Datasets.

Breitkreutz BJ, Stark C, Tyers M.

Genome Biol. 2002;3(12):PREPRINT0013. Epub 2002 Nov 21.

PMID:
12537553
20.

ConsensusPathDB--a database for integrating human functional interaction networks.

Kamburov A, Wierling C, Lehrach H, Herwig R.

Nucleic Acids Res. 2009 Jan;37(Database issue):D623-8. doi: 10.1093/nar/gkn698. Epub 2008 Oct 21.

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