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Results: 1 to 20 of 116

1.

Whole-genome positive selection and habitat-driven evolution in a shallow and a deep-sea urchin.

Oliver TA, Garfield DA, Manier MK, Haygood R, Wray GA, Palumbi SR.

Genome Biol Evol. 2010;2:800-14. doi: 10.1093/gbe/evq063. Epub 2010 Oct 8.

PMID:
20935062
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Genome-wide polymorphisms show unexpected targets of natural selection.

Pespeni MH, Garfield DA, Manier MK, Palumbi SR.

Proc Biol Sci. 2012 Apr 7;279(1732):1412-20. doi: 10.1098/rspb.2011.1823. Epub 2011 Oct 12.

PMID:
21993504
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genome-wide patterns of codon bias are shaped by natural selection in the purple sea urchin, Strongylocentrotus purpuratus.

Kober KM, Pogson GH.

G3 (Bethesda). 2013 Jul 8;3(7):1069-83. doi: 10.1534/g3.113.005769.

PMID:
23637123
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Structure, expression, and transcriptional regulation of the Strongylocentrotus franciscanus spec gene family encoding intracellular calcium-binding proteins.

Villinski JT, Kiyama T, Dayal S, Zhang N, Liang S, Klein WH.

Dev Genes Evol. 2005 Aug;215(8):410-22. Epub 2005 May 4.

PMID:
15871032
[PubMed - indexed for MEDLINE]
5.

A rapidly diverging EGF protein regulates species-specific signal transduction in early sea urchin development.

Kamei N, Swanson WJ, Glabe CG.

Dev Biol. 2000 Sep 15;225(2):267-76.

PMID:
10985849
[PubMed - indexed for MEDLINE]
Free Article
6.

Sea urchin actin gene subtypes. Gene number, linkage and evolution.

Lee JJ, Shott RJ, Rose SJ 3rd, Thomas TL, Britten RJ, Davidson EH.

J Mol Biol. 1984 Jan 15;172(2):149-76.

PMID:
6319714
[PubMed - indexed for MEDLINE]
7.

Evolutionary analysis of the cis-regulatory region of the spicule matrix gene SM50 in strongylocentrotid sea urchins.

Walters J, Binkley E, Haygood R, Romano LA.

Dev Biol. 2008 Mar 15;315(2):567-78. doi: 10.1016/j.ydbio.2008.01.007. Epub 2008 Jan 18.

PMID:
18262514
[PubMed - indexed for MEDLINE]
Free Article
8.

Phylogenomics of strongylocentrotid sea urchins.

Kober KM, Bernardi G.

BMC Evol Biol. 2013 Apr 23;13:88. doi: 10.1186/1471-2148-13-88.

PMID:
23617542
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Differences in the regulation of growth and biomineralization genes revealed through long-term common-garden acclimation and experimental genomics in the purple sea urchin.

Pespeni MH, Barney BT, Palumbi SR.

Evolution. 2013 Jul;67(7):1901-14. doi: 10.1111/evo.12036. Epub 2013 Jan 23.

PMID:
23815648
[PubMed - indexed for MEDLINE]
10.

SpBase: the sea urchin genome database and web site.

Cameron RA, Samanta M, Yuan A, He D, Davidson E.

Nucleic Acids Res. 2009 Jan;37(Database issue):D750-4. doi: 10.1093/nar/gkn887. Epub 2008 Nov 14.

PMID:
19010966
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Cytochrome P450 1 genes in early deuterostomes (tunicates and sea urchins) and vertebrates (chicken and frog): origin and diversification of the CYP1 gene family.

Goldstone JV, Goldstone HM, Morrison AM, Tarrant A, Kern SE, Woodin BR, Stegeman JJ.

Mol Biol Evol. 2007 Dec;24(12):2619-31. Epub 2007 Oct 4.

PMID:
17916789
[PubMed - indexed for MEDLINE]
Free Article
12.
13.

Molecular phylogenies and divergence times of sea urchin species of Strongylocentrotidae, Echinoida.

Lee YH.

Mol Biol Evol. 2003 Aug;20(8):1211-21. Epub 2003 May 30.

PMID:
12777524
[PubMed - indexed for MEDLINE]
Free Article
14.

The genomic repertoire for cell cycle control and DNA metabolism in S. purpuratus.

Fernandez-Guerra A, Aze A, Morales J, Mulner-Lorillon O, Cosson B, Cormier P, Bradham C, Adams N, Robertson AJ, Marzluff WF, Coffman JA, Genevière AM.

Dev Biol. 2006 Dec 1;300(1):238-51. Epub 2006 Sep 14.

PMID:
17078944
[PubMed - indexed for MEDLINE]
Free Article
15.

Structure/function analysis of the sea urchin sperm adhesive protein bindin.

Lopez A, Miraglia SJ, Glabe CG.

Dev Biol. 1993 Mar;156(1):24-33.

PMID:
8449368
[PubMed - indexed for MEDLINE]
16.
17.

Adaptive evolution of sperm bindin tracks egg incompatibility in neotropical sea urchins of the genus Echinometra.

McCartney MA, Lessios HA.

Mol Biol Evol. 2004 Apr;21(4):732-45. Epub 2004 Feb 12.

PMID:
14963103
[PubMed - indexed for MEDLINE]
Free Article
18.

Signs of adaptation to local pH conditions across an environmental mosaic in the California Current Ecosystem.

Pespeni MH, Chan F, Menge BA, Palumbi SR.

Integr Comp Biol. 2013 Nov;53(5):857-70. doi: 10.1093/icb/ict094. Epub 2013 Aug 26. Review.

PMID:
23980118
[PubMed - indexed for MEDLINE]
19.

The genomic underpinnings of apoptosis in Strongylocentrotus purpuratus.

Robertson AJ, Croce J, Carbonneau S, Voronina E, Miranda E, McClay DR, Coffman JA.

Dev Biol. 2006 Dec 1;300(1):321-34. Epub 2006 Aug 30.

PMID:
17010332
[PubMed - indexed for MEDLINE]
Free Article
20.

Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters.

Poustka AJ, Groth D, Hennig S, Thamm S, Cameron A, Beck A, Reinhardt R, Herwig R, Panopoulou G, Lehrach H.

Genome Res. 2003 Dec;13(12):2736-46.

PMID:
14656975
[PubMed - indexed for MEDLINE]
Free PMC Article

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