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Results: 1 to 20 of 221

1.

Sequence and structure of Brassica rapa chromosome A3.

Mun JH, Kwon SJ, Seol YJ, Kim JA, Jin M, Kim JS, Lim MH, Lee SI, Hong JK, Park TH, Lee SC, Kim BJ, Seo MS, Baek S, Lee MJ, Shin JY, Hahn JH, Hwang YJ, Lim KB, Park JY, Lee J, Yang TJ, Yu HJ, Choi IY, Choi BS, Choi SR, Ramchiary N, Lim YP, Fraser F, Drou N, Soumpourou E, Trick M, Bancroft I, Sharpe AG, Parkin IA, Batley J, Edwards D, Park BS.

Genome Biol. 2010;11(9):R94. doi: 10.1186/gb-2010-11-9-r94. Epub 2010 Sep 27.

PMID:
20875114
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis.

Trick M, Kwon SJ, Choi SR, Fraser F, Soumpourou E, Drou N, Wang Z, Lee SY, Yang TJ, Mun JH, Paterson AH, Town CD, Pires JC, Pyo Lim Y, Park BS, Bancroft I.

BMC Genomics. 2009 Nov 18;10:539. doi: 10.1186/1471-2164-10-539.

PMID:
19922648
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication.

Mun JH, Kwon SJ, Yang TJ, Seol YJ, Jin M, Kim JA, Lim MH, Kim JS, Baek S, Choi BS, Yu HJ, Kim DS, Kim N, Lim KB, Lee SI, Hahn JH, Lim YP, Bancroft I, Park BS.

Genome Biol. 2009;10(10):R111. doi: 10.1186/gb-2009-10-10-r111. Epub 2009 Oct 12.

PMID:
19821981
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The genome of the mesopolyploid crop species Brassica rapa.

Wang X, Wang H, Wang J, Sun R, Wu J, Liu S, Bai Y, Mun JH, Bancroft I, Cheng F, Huang S, Li X, Hua W, Wang J, Wang X, Freeling M, Pires JC, Paterson AH, Chalhoub B, Wang B, Hayward A, Sharpe AG, Park BS, Weisshaar B, Liu B, Li B, Liu B, Tong C, Song C, Duran C, Peng C, Geng C, Koh C, Lin C, Edwards D, Mu D, Shen D, Soumpourou E, Li F, Fraser F, Conant G, Lassalle G, King GJ, Bonnema G, Tang H, Wang H, Belcram H, Zhou H, Hirakawa H, Abe H, Guo H, Wang H, Jin H, Parkin IA, Batley J, Kim JS, Just J, Li J, Xu J, Deng J, Kim JA, Li J, Yu J, Meng J, Wang J, Min J, Poulain J, Wang J, Hatakeyama K, Wu K, Wang L, Fang L, Trick M, Links MG, Zhao M, Jin M, Ramchiary N, Drou N, Berkman PJ, Cai Q, Huang Q, Li R, Tabata S, Cheng S, Zhang S, Zhang S, Huang S, Sato S, Sun S, Kwon SJ, Choi SR, Lee TH, Fan W, Zhao X, Tan X, Xu X, Wang Y, Qiu Y, Yin Y, Li Y, Du Y, Liao Y, Lim Y, Narusaka Y, Wang Y, Wang Z, Li Z, Wang Z, Xiong Z, Zhang Z; Brassica rapa Genome Sequencing Project Consortium.

Nat Genet. 2011 Aug 28;43(10):1035-9. doi: 10.1038/ng.919.

PMID:
21873998
[PubMed - indexed for MEDLINE]
5.

Sequenced BAC anchored reference genetic map that reconciles the ten individual chromosomes of Brassica rapa.

Kim H, Choi SR, Bae J, Hong CP, Lee SY, Hossain MJ, Van Nguyen D, Jin M, Park BS, Bang JW, Bancroft I, Lim YP.

BMC Genomics. 2009 Sep 15;10:432. doi: 10.1186/1471-2164-10-432.

PMID:
19751531
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Comparative mapping, genomic structure, and expression analysis of eight pseudo-response regulator genes in Brassica rapa.

Kim JA, Kim JS, Hong JK, Lee YH, Choi BS, Seol YJ, Jeon CH.

Mol Genet Genomics. 2012 May;287(5):373-88. doi: 10.1007/s00438-012-0682-z. Epub 2012 Apr 1.

PMID:
22466714
[PubMed - indexed for MEDLINE]
7.

Conserved microstructure of the Brassica B Genome of Brassica nigra in relation to homologous regions of Arabidopsis thaliana, B. rapa and B. oleracea.

Navabi ZK, Huebert T, Sharpe AG, O'Neill CM, Bancroft I, Parkin IA.

BMC Genomics. 2013 Apr 15;14:250. doi: 10.1186/1471-2164-14-250.

PMID:
23586706
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Comparative sequence analysis for Brassica oleracea with similar sequences in B. rapa and Arabidopsis thaliana.

Qiu D, Gao M, Li G, Quiros C.

Plant Cell Rep. 2009 Apr;28(4):649-61. doi: 10.1007/s00299-008-0661-3. Epub 2008 Dec 28.

PMID:
19112567
[PubMed - indexed for MEDLINE]
9.

Conservation of the microstructure of genome segments in Brassica napus and its diploid relatives.

Rana D, van den Boogaart T, O'Neill CM, Hynes L, Bent E, Macpherson L, Park JY, Lim YP, Bancroft I.

Plant J. 2004 Dec;40(5):725-33.

PMID:
15546355
[PubMed - indexed for MEDLINE]
10.

The first generation of a BAC-based physical map of Brassica rapa.

Mun JH, Kwon SJ, Yang TJ, Kim HS, Choi BS, Baek S, Kim JS, Jin M, Kim JA, Lim MH, Lee SI, Kim HI, Kim H, Lim YP, Park BS.

BMC Genomics. 2008 Jun 12;9:280. doi: 10.1186/1471-2164-9-280.

PMID:
18549474
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Physical mapping and microsynteny of Brassica rapa ssp. pekinensis genome corresponding to a 222 kbp gene-rich region of Arabidopsis chromosome 4 and partially duplicated on chromosome 5.

Park JY, Koo DH, Hong CP, Lee SJ, Jeon JW, Lee SH, Yun PY, Park BS, Kim HR, Bang JW, Plaha P, Bancroft I, Lim YP.

Mol Genet Genomics. 2005 Dec;274(6):579-88. Epub 2005 Nov 9.

PMID:
16283385
[PubMed - indexed for MEDLINE]
12.

Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa.

Yang TJ, Kim JS, Kwon SJ, Lim KB, Choi BS, Kim JA, Jin M, Park JY, Lim MH, Kim HI, Lim YP, Kang JJ, Hong JH, Kim CB, Bhak J, Bancroft I, Park BS.

Plant Cell. 2006 Jun;18(6):1339-47. Epub 2006 Apr 21.

PMID:
16632644
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Sequence-level comparative analysis of the Brassica napus genome around two stearoyl-ACP desaturase loci.

Cho K, O'Neill CM, Kwon SJ, Yang TJ, Smooker AM, Fraser F, Bancroft I.

Plant J. 2010 Feb;61(4):591-9. doi: 10.1111/j.1365-313X.2009.04084.x. Epub 2009 Nov 19.

PMID:
19929877
[PubMed - indexed for MEDLINE]
14.

Deciphering the diploid ancestral genome of the Mesohexaploid Brassica rapa.

Cheng F, Mandáková T, Wu J, Xie Q, Lysak MA, Wang X.

Plant Cell. 2013 May;25(5):1541-54. doi: 10.1105/tpc.113.110486. Epub 2013 May 7.

PMID:
23653472
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Structural and functional comparative mapping between the Brassica A genomes in allotetraploid Brassica napus and diploid Brassica rapa.

Jiang C, Ramchiary N, Ma Y, Jin M, Feng J, Li R, Wang H, Long Y, Choi SR, Zhang C, Cowling WA, Park BS, Lim YP, Meng J.

Theor Appl Genet. 2011 Oct;123(6):927-41. doi: 10.1007/s00122-011-1637-1. Epub 2011 Jul 15.

PMID:
21761162
[PubMed - indexed for MEDLINE]
16.

Characterization of the centromere and peri-centromere retrotransposons in Brassica rapa and their distribution in related Brassica species.

Lim KB, Yang TJ, Hwang YJ, Kim JS, Park JY, Kwon SJ, Kim J, Choi BS, Lim MH, Jin M, Kim HI, de Jong H, Bancroft I, Lim Y, Park BS.

Plant J. 2007 Jan;49(2):173-83. Epub 2006 Dec 6. Erratum in: Plant J. 2007 Feb;49(4):765.

PMID:
17156411
[PubMed - indexed for MEDLINE]
17.

Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes.

Panjabi P, Jagannath A, Bisht NC, Padmaja KL, Sharma S, Gupta V, Pradhan AK, Pental D.

BMC Genomics. 2008 Mar 3;9:113. doi: 10.1186/1471-2164-9-113.

PMID:
18315867
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Identification and profiling of novel microRNAs in the Brassica rapa genome based on small RNA deep sequencing.

Kim B, Yu HJ, Park SG, Shin JY, Oh M, Kim N, Mun JH.

BMC Plant Biol. 2012 Nov 19;12:218. doi: 10.1186/1471-2229-12-218.

PMID:
23163954
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

A Survey of the Brassica rapa genome by BAC-end sequence analysis and comparison with Arabidopsis thaliana.

Hong CP, Plaha P, Koo DH, Yang TJ, Choi SR, Lee YK, Uhm T, Bang JW, Edwards D, Bancroft I, Park BS, Lee J, Lim YP.

Mol Cells. 2006 Dec 31;22(3):300-7.

PMID:
17202858
[PubMed - indexed for MEDLINE]
Free Article
20.

The evolution of Brassica napus FLOWERING LOCUS T paralogues in the context of inverted chromosomal duplication blocks.

Wang J, Long Y, Wu B, Liu J, Jiang C, Shi L, Zhao J, King GJ, Meng J.

BMC Evol Biol. 2009 Nov 25;9:271. doi: 10.1186/1471-2148-9-271.

PMID:
19939256
[PubMed - indexed for MEDLINE]
Free PMC Article

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