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1.

Analysis of human and mouse reprogramming of somatic cells to induced pluripotent stem cells. What is in the plate?

Boué S, Paramonov I, Barrero MJ, Izpisúa Belmonte JC.

PLoS One. 2010 Sep 17;5(9). pii: e12664. doi: 10.1371/journal.pone.0012664.

2.

Residual expression of reprogramming factors affects the transcriptional program and epigenetic signatures of induced pluripotent stem cells.

Sommer CA, Christodoulou C, Gianotti-Sommer A, Shen SS, Sailaja BS, Hezroni H, Spira A, Meshorer E, Kotton DN, Mostoslavsky G.

PLoS One. 2012;7(12):e51711. doi: 10.1371/journal.pone.0051711. Epub 2012 Dec 14.

3.

Signaling pathways controlling pluripotency and early cell fate decisions of human induced pluripotent stem cells.

Vallier L, Touboul T, Brown S, Cho C, Bilican B, Alexander M, Cedervall J, Chandran S, Ahrlund-Richter L, Weber A, Pedersen RA.

Stem Cells. 2009 Nov;27(11):2655-66. doi: 10.1002/stem.199.

4.

Genome-wide reprogramming in hybrids of somatic cells and embryonic stem cells.

Ambrosi DJ, Tanasijevic B, Kaur A, Obergfell C, O'Neill RJ, Krueger W, Rasmussen TP.

Stem Cells. 2007 May;25(5):1104-13. Epub 2007 Feb 1.

5.

Evolution of induced pluripotent stem cell technology.

Zhou H, Ding S.

Curr Opin Hematol. 2010 Jul;17(4):276-80. doi: 10.1097/MOH.0b013e328339f2ee. Review.

PMID:
20442654
6.

Modulation of chromatin modifying factors' gene expression in embryonic and induced pluripotent stem cells.

Luzzani C, Solari C, Losino N, Ariel W, Romorini L, Bluguermann C, Sevlever G, Barañao L, Miriuka S, Guberman A.

Biochem Biophys Res Commun. 2011 Jul 15;410(4):816-22. doi: 10.1016/j.bbrc.2011.06.070. Epub 2011 Jun 15.

PMID:
21703227
7.

Generation of mice derived from induced pluripotent stem cells.

Boland MJ, Hazen JL, Nazor KL, Rodriguez AR, Martin G, Kupriyanov S, Baldwin KK.

J Vis Exp. 2012 Nov 29;(69):e4003. doi: 10.3791/4003.

8.

Comparison of reprogramming genes in induced pluripotent stem cells and nuclear transfer cloned embryos.

Duan L, Wang Z, Shen J, Shan Z, Shen X, Wu Y, Sun R, Li T, Yuan R, Zhao Q, Bai G, Gu Y, Jin L, Lei L.

Stem Cell Rev. 2014 Aug;10(4):548-60. doi: 10.1007/s12015-014-9516-1.

PMID:
24828831
9.

A PRC2-dependent repressive role of PRDM14 in human embryonic stem cells and induced pluripotent stem cell reprogramming.

Chan YS, Göke J, Lu X, Venkatesan N, Feng B, Su IH, Ng HH.

Stem Cells. 2013 Apr;31(4):682-92. doi: 10.1002/stem.1307.

10.

Comparative gene expression signature of pig, human and mouse induced pluripotent stem cell lines reveals insight into pig pluripotency gene networks.

Liu Y, Ma Y, Yang JY, Cheng D, Liu X, Ma X, West FD, Wang H.

Stem Cell Rev. 2014 Apr;10(2):162-76. doi: 10.1007/s12015-013-9485-9.

PMID:
24338594
11.

Progress made in the reprogramming field: new factors, new strategies and a new outlook.

Hussein SM, Nagy AA.

Curr Opin Genet Dev. 2012 Oct;22(5):435-43. doi: 10.1016/j.gde.2012.08.007. Epub 2012 Sep 5. Review.

PMID:
22959308
12.

Zfp296 is a novel, pluripotent-specific reprogramming factor.

Fischedick G, Klein DC, Wu G, Esch D, Höing S, Han DW, Reinhardt P, Hergarten K, Tapia N, Schöler HR, Sterneckert JL.

PLoS One. 2012;7(4):e34645. doi: 10.1371/journal.pone.0034645. Epub 2012 Apr 2.

13.

Overlapping genes may control reprogramming of mouse somatic cells into induced pluripotent stem cells (iPSCs) and breast cancer stem cells.

Mosca E, Cocola C, Sabour D, Pelucchi P, Bertalot G, Palumbo O, Carella M, Götte M, Schöler HR, Reinbold R, Zucchi I, Milanesi L.

In Silico Biol. 2010;10(5-6):207-21. doi: 10.3233/ISB-2010-0437.

PMID:
22430355
14.

DNA methylation dynamics in human induced pluripotent stem cells over time.

Nishino K, Toyoda M, Yamazaki-Inoue M, Fukawatase Y, Chikazawa E, Sakaguchi H, Akutsu H, Umezawa A.

PLoS Genet. 2011 May;7(5):e1002085. doi: 10.1371/journal.pgen.1002085. Epub 2011 May 26.

15.

Molecular insights into the heterogeneity of telomere reprogramming in induced pluripotent stem cells.

Wang F, Yin Y, Ye X, Liu K, Zhu H, Wang L, Chiourea M, Okuka M, Ji G, Dan J, Zuo B, Li M, Zhang Q, Liu N, Chen L, Pan X, Gagos S, Keefe DL, Liu L.

Cell Res. 2012 Apr;22(4):757-68. doi: 10.1038/cr.2011.201. Epub 2011 Dec 20.

16.

Functional modules distinguish human induced pluripotent stem cells from embryonic stem cells.

Wang A, Huang K, Shen Y, Xue Z, Cai C, Horvath S, Fan G.

Stem Cells Dev. 2011 Nov;20(11):1937-50. doi: 10.1089/scd.2010.0574. Epub 2011 Jun 20.

17.

HMGA1 reprograms somatic cells into pluripotent stem cells by inducing stem cell transcriptional networks.

Shah SN, Kerr C, Cope L, Zambidis E, Liu C, Hillion J, Belton A, Huso DL, Resar LM.

PLoS One. 2012;7(11):e48533. doi: 10.1371/journal.pone.0048533. Epub 2012 Nov 15.

18.

Induced pluripotent stem cells (iPSCs)--a new era of reprogramming.

Kang L, Kou Z, Zhang Y, Gao S.

J Genet Genomics. 2010 Jul;37(7):415-21. doi: 10.1016/S1673-8527(09)60060-6.

PMID:
20659705
19.

Self-organizing map of gene regulatory networks for cell phenotypes during reprogramming.

Zhang L, Zheng Y, Li D, Zhong Y.

Comput Biol Chem. 2011 Aug 10;35(4):211-7. doi: 10.1016/j.compbiolchem.2011.05.002. Epub 2011 May 26.

PMID:
21864790
20.

Generation of rabbit pluripotent stem cell lines.

Tancos Z, Nemes C, Polgar Z, Gocza E, Daniel N, Stout TA, Maraghechi P, Pirity MK, Osteil P, Tapponnier Y, Markossian S, Godet M, Afanassieff M, Bosze Z, Duranthon V, Savatier P, Dinnyes A.

Theriogenology. 2012 Nov;78(8):1774-86. doi: 10.1016/j.theriogenology.2012.06.017. Epub 2012 Aug 24. Review.

PMID:
22925641
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