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Results: 1 to 20 of 95

1.

Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity.

Lang D, Weiche B, Timmerhaus G, Richardt S, Riaño-Pachón DM, Corrêa LG, Reski R, Mueller-Roeber B, Rensing SA.

Genome Biol Evol. 2010 Jul 19;2:488-503. doi: 10.1093/gbe/evq032.

PMID:
20644220
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom.

Xu Z, Zhang D, Hu J, Zhou X, Ye X, Reichel KL, Stewart NR, Syrenne RD, Yang X, Gao P, Shi W, Doeppke C, Sykes RW, Burris JN, Bozell JJ, Cheng MZ, Hayes DG, Labbe N, Davis M, Stewart CN Jr, Yuan JS.

BMC Bioinformatics. 2009 Oct 8;10 Suppl 11:S3. doi: 10.1186/1471-2105-10-S11-S3.

PMID:
19811687
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

PlanTAPDB, a phylogeny-based resource of plant transcription-associated proteins.

Richardt S, Lang D, Reski R, Frank W, Rensing SA.

Plant Physiol. 2007 Apr;143(4):1452-66. Epub 2007 Mar 2.

PMID:
17337525
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Genome-wide identification, classification and analysis of heat shock transcription factor family in maize.

Lin YX, Jiang HY, Chu ZX, Tang XL, Zhu SW, Cheng BJ.

BMC Genomics. 2011 Jan 27;12:76. doi: 10.1186/1471-2164-12-76.

PMID:
21272351
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The family of DOF transcription factors in Brachypodium distachyon: phylogenetic comparison with rice and barley DOFs and expression profiling.

Hernando-Amado S, González-Calle V, Carbonero P, Barrero-Sicilia C.

BMC Plant Biol. 2012 Nov 5;12:202. doi: 10.1186/1471-2229-12-202.

PMID:
23126376
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genome-wide analysis of plant-specific Dof transcription factor family in tomato.

Cai X, Zhang Y, Zhang C, Zhang T, Hu T, Ye J, Zhang J, Wang T, Li H, Ye Z.

J Integr Plant Biol. 2013 Jun;55(6):552-66. doi: 10.1111/jipb.12043.

PMID:
23462305
[PubMed - indexed for MEDLINE]
7.

Comparative genomic analysis of NAC transcriptional factors to dissect the regulatory mechanisms for cell wall biosynthesis.

Yao D, Wei Q, Xu W, Syrenne RD, Yuan JS, Su Z.

BMC Bioinformatics. 2012;13 Suppl 15:S10. doi: 10.1186/1471-2105-13-S15-S10. Epub 2012 Sep 11.

PMID:
23046216
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Genome-wide analysis of WRKY transcription factors in Solanum lycopersicum.

Huang S, Gao Y, Liu J, Peng X, Niu X, Fei Z, Cao S, Liu Y.

Mol Genet Genomics. 2012 Jun;287(6):495-513. doi: 10.1007/s00438-012-0696-6. Epub 2012 May 9.

PMID:
22570076
[PubMed - indexed for MEDLINE]
9.

Heat shock transcriptional factors in Malus domestica: identification, classification and expression analysis.

Giorno F, Guerriero G, Baric S, Mariani C.

BMC Genomics. 2012 Nov 20;13:639. doi: 10.1186/1471-2164-13-639.

PMID:
23167251
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Plant microRNAs: an insight into their gene structures and evolution.

Tang G.

Semin Cell Dev Biol. 2010 Oct;21(8):782-9. doi: 10.1016/j.semcdb.2010.07.009. Epub 2010 Aug 4. Review.

PMID:
20691276
[PubMed - indexed for MEDLINE]
11.

Genome-wide analysis of the MYB transcription factor superfamily in soybean.

Du H, Yang SS, Liang Z, Feng BR, Liu L, Huang YB, Tang YX.

BMC Plant Biol. 2012 Jul 9;12:106. doi: 10.1186/1471-2229-12-106.

PMID:
22776508
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genome-wide analysis of heat shock transcription factor families in rice and Arabidopsis.

Guo J, Wu J, Ji Q, Wang C, Luo L, Yuan Y, Wang Y, Wang J.

J Genet Genomics. 2008 Feb;35(2):105-18. doi: 10.1016/S1673-8527(08)60016-8.

PMID:
18407058
[PubMed - indexed for MEDLINE]
13.

Genomic evolution and complexity of the Anaphase-promoting Complex (APC) in land plants.

Lima Mde F, Eloy NB, Pegoraro C, Sagit R, Rojas C, Bretz T, Vargas L, Elofsson A, de Oliveira AC, Hemerly AS, Ferreira PC.

BMC Plant Biol. 2010 Nov 18;10:254. doi: 10.1186/1471-2229-10-254.

PMID:
21087491
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genome-wide classification and expression analysis of MYB transcription factor families in rice and Arabidopsis.

Katiyar A, Smita S, Lenka SK, Rajwanshi R, Chinnusamy V, Bansal KC.

BMC Genomics. 2012 Oct 10;13:544. doi: 10.1186/1471-2164-13-544.

PMID:
23050870
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Plant microRNAs and development.

Jover-Gil S, Candela H, Ponce MR.

Int J Dev Biol. 2005;49(5-6):733-44. Review.

PMID:
16096978
[PubMed - indexed for MEDLINE]
Free Article
16.

An ancestral MADS-box gene duplication occurred before the divergence of plants and animals.

Alvarez-Buylla ER, Pelaz S, Liljegren SJ, Gold SE, Burgeff C, Ditta GS, Ribas de Pouplana L, Martínez-Castilla L, Yanofsky MF.

Proc Natl Acad Sci U S A. 2000 May 9;97(10):5328-33.

PMID:
10805792
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Structure and evolution of the plant cation diffusion facilitator family of ion transporters.

Gustin JL, Zanis MJ, Salt DE.

BMC Evol Biol. 2011 Mar 24;11:76. doi: 10.1186/1471-2148-11-76.

PMID:
21435223
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The phytocyanin gene family in rice (Oryza sativa L.): genome-wide identification, classification and transcriptional analysis.

Ma H, Zhao H, Liu Z, Zhao J.

PLoS One. 2011;6(10):e25184. doi: 10.1371/journal.pone.0025184. Epub 2011 Oct 3.

PMID:
21984902
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus.

Rodgers-Melnick E, Mane SP, Dharmawardhana P, Slavov GT, Crasta OR, Strauss SH, Brunner AM, Difazio SP.

Genome Res. 2012 Jan;22(1):95-105. doi: 10.1101/gr.125146.111. Epub 2011 Oct 5.

PMID:
21974993
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Comprehensive comparative analysis of kinesins in photosynthetic eukaryotes.

Richardson DN, Simmons MP, Reddy AS.

BMC Genomics. 2006 Jan 31;7:18.

PMID:
16448571
[PubMed - indexed for MEDLINE]
Free PMC Article

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