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Results: 1 to 20 of 79

1.

Dealing with sparse data in predicting outcomes of HIV combination therapies.

Bogojeska J, Bickel S, Altmann A, Lengauer T.

Bioinformatics. 2010 Sep 1;26(17):2085-92. doi: 10.1093/bioinformatics/btq361. Epub 2010 Jul 12.

PMID:
20624779
[PubMed - indexed for MEDLINE]
Free Article
2.

A comparison of three computational modelling methods for the prediction of virological response to combination HIV therapy.

Wang D, Larder B, Revell A, Montaner J, Harrigan R, De Wolf F, Lange J, Wegner S, Ruiz L, Pérez-Elías MJ, Emery S, Gatell J, D'Arminio Monforte A, Torti C, Zazzi M, Lane C.

Artif Intell Med. 2009 Sep;47(1):63-74. doi: 10.1016/j.artmed.2009.05.002. Epub 2009 Jun 12.

PMID:
19524413
[PubMed - indexed for MEDLINE]
3.

Improved prediction of response to antiretroviral combination therapy using the genetic barrier to drug resistance.

Altmann A, Beerenwinkel N, Sing T, Savenkov I, Doumer M, Kaiser R, Rhee SY, Fessel WJ, Shafer RW, Lengauer T.

Antivir Ther. 2007;12(2):169-78.

PMID:
17503659
[PubMed - indexed for MEDLINE]
4.

Study of the impact of HIV genotypic drug resistance testing on therapy efficacy.

Van Vaerenbergh K.

Verh K Acad Geneeskd Belg. 2001;63(5):447-73. Review.

PMID:
11813503
[PubMed - indexed for MEDLINE]
5.

Investigation of expert rule bases, logistic regression, and non-linear machine learning techniques for predicting response to antiretroviral treatment.

Prosperi MC, Altmann A, Rosen-Zvi M, Aharoni E, Borgulya G, Bazso F, Sönnerborg A, Schülter E, Struck D, Ulivi G, Vandamme AM, Vercauteren J, Zazzi M; EuResist and Virolab study groups.

Antivir Ther. 2009;14(3):433-42.

PMID:
19474477
[PubMed - indexed for MEDLINE]
6.

Hierarchical Bayes model for predicting effectiveness of HIV combination therapies.

Bogojeska J, Lengauer T.

Stat Appl Genet Mol Biol. 2012;11(3):Article 11.

PMID:
22611598
[PubMed - indexed for MEDLINE]
7.

The development of artificial neural networks to predict virological response to combination HIV therapy.

Larder B, Wang D, Revell A, Montaner J, Harrigan R, De Wolf F, Lange J, Wegner S, Ruiz L, Pérez-Elías MJ, Emery S, Gatell J, Monforte AD, Torti C, Zazzi M, Lane C.

Antivir Ther. 2007;12(1):15-24.

PMID:
17503743
[PubMed - indexed for MEDLINE]
8.

Learning from past treatments and their outcome improves prediction of in vivo response to anti-HIV therapy.

Saigo H, Altmann A, Bogojeska J, Müller F, Nowozin S, Lengauer T.

Stat Appl Genet Mol Biol. 2011;10:Article 6. doi: 10.2202/1544-6115.1604. Epub 2011 Jan 14.

PMID:
21291416
[PubMed - indexed for MEDLINE]
9.

Construction, training and clinical validation of an interpretation system for genotypic HIV-1 drug resistance based on fuzzy rules revised by virological outcomes.

De Luca A, Vendittelli M, Baldini F, Di Giambenedetto S, Trotta MP, Cingolani A, Bacarelli A, Gori C, Perno CF, Antinori A, Ulivi G.

Antivir Ther. 2004 Aug;9(4):583-93.

PMID:
15456090
[PubMed - indexed for MEDLINE]
10.

Accurate prediction of HIV-1 drug response from the reverse transcriptase and protease amino acid sequences using sparse models created by convex optimization.

Rabinowitz M, Myers L, Banjevic M, Chan A, Sweetkind-Singer J, Haberer J, McCann K, Wolkowicz R.

Bioinformatics. 2006 Mar 1;22(5):541-9. Epub 2005 Dec 20.

PMID:
16368772
[PubMed - indexed for MEDLINE]
Free Article
11.

HIV drug susceptibility and treatment response to mega-HAART regimen in patients from the Frankfurt HIV cohort.

Miller V, Cozzi-Lepri A, Hertogs K, Gute P, Larder B, Bloor S, Klauke S, Rabenau H, Phillips A, Staszewski S.

Antivir Ther. 2000 Mar;5(1):49-55.

PMID:
10846593
[PubMed - indexed for MEDLINE]
12.

Molecular biological assessment methods and understanding the course of the HIV infection.

Katzenstein TL.

APMIS Suppl. 2003;(114):1-37. Review.

PMID:
14626050
[PubMed - indexed for MEDLINE]
13.

[Recommendations from the GESIDA/Spanish AIDS Plan regarding antiretroviral treatment in adults with human immunodeficiency virus infection (update February 2009)].

Panel de expertos de Gesida y Plan Nacional sobre el Sida.

Enferm Infecc Microbiol Clin. 2009 Apr;27(4):222-35. doi: 10.1016/j.eimc.2008.11.002. Epub 2009 Feb 26. Spanish. Erratum in: Enferm Infecc Microbiol Clin. 2009 Oct;27(8):491.

PMID:
19246124
[PubMed - indexed for MEDLINE]
14.

Application of artificial neural networks for decision support in medicine.

Larder B, Wang D, Revell A.

Methods Mol Biol. 2008;458:123-36.

PMID:
19065808
[PubMed - indexed for MEDLINE]
15.

Advantages of predicted phenotypes and statistical learning models in inferring virological response to antiretroviral therapy from HIV genotype.

Altmann A, Sing T, Vermeiren H, Winters B, Van Craenenbroeck E, Van der Borght K, Rhee SY, Shafer RW, Schülter E, Kaiser R, Peres Y, Sönnerborg A, Fessel WJ, Incardona F, Zazzi M, Bacheler L, Van Vlijmen H, Lengauer T.

Antivir Ther. 2009;14(2):273-83.

PMID:
19430102
[PubMed - indexed for MEDLINE]
16.

Predictors of the virological response to a change in the antiretroviral treatment regimen in HIV-1-infected patients enrolled in a randomized trial comparing genotyping, phenotyping and standard of care (Narval trial, ANRS 088).

Vray M, Meynard JL, Dalban C, Morand-Joubert L, Clavel F, Brun-Vézinet F, Peytavin G, Costagliola D, Girard PM; Narval Trial Group.

Antivir Ther. 2003 Oct;8(5):427-34.

PMID:
14640390
[PubMed - indexed for MEDLINE]
17.

Phenotypic testing predicts virological response in successive protease inhibitor-based regimens.

Pérez-Elías MJ, Lanier R, Muñoz V, Garcia-Arata I, Casado JL, Marti-Belda P, Moreno A, Dronda F, Antela A, Marco S, Moreno S.

AIDS. 2000 Jun 16;14(9):F95-101.

PMID:
10894269
[PubMed - indexed for MEDLINE]
18.

Guidelines for using antiretroviral agents among HIV-infected adults and adolescents.

Dybul M, Fauci AS, Bartlett JG, Kaplan JE, Pau AK; Panel on Clinical Practices for Treatment of HIV.

Ann Intern Med. 2002 Sep 3;137(5 Pt 2):381-433.

PMID:
12617573
[PubMed - indexed for MEDLINE]
19.

Guidelines for using antiretroviral agents among HIV-infected adults and adolescents. Recommendations of the Panel on Clinical Practices for Treatment of HIV.

Dybul M, Fauci AS, Bartlett JG, Kaplan JE, Pau AK; Panel on Clinical Practices for the Treatment of HIV.

MMWR Recomm Rep. 2002 May 17;51(RR-7):1-55.

PMID:
12027060
[PubMed - indexed for MEDLINE]
Free Article
20.

Predicting the response to combination antiretroviral therapy: retrospective validation of geno2pheno-THEO on a large clinical database.

Altmann A, Däumer M, Beerenwinkel N, Peres Y, Schülter E, Büch J, Rhee SY, Sönnerborg A, Fessel WJ, Shafer RW, Zazzi M, Kaiser R, Lengauer T.

J Infect Dis. 2009 Apr 1;199(7):999-1006. doi: 10.1086/597305.

PMID:
19239365
[PubMed - indexed for MEDLINE]
Free Article

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