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Development of admixture mapping panels for African Americans from commercial high-density SNP arrays.

Chen G, Shriner D, Zhou J, Doumatey A, Huang H, Gerry NP, Herbert A, Christman MF, Chen Y, Dunston GM, Faruque MU, Rotimi CN, Adeyemo A.

BMC Genomics. 2010 Jul 5;11:417. doi: 10.1186/1471-2164-11-417.


Intrahepatic Cholestasis of Pregnancy (ICP) in U.S. Latinas and Chileans: Clinical features, Ancestry Analysis, and Admixture Mapping.

Bull LN, Hu D, Shah S, Temple L, Silva K, Huntsman S, Melgar J, Geiser MT, Sanford U, Ortiz JA, Lee RH, Kusanovic JP, Ziv E, Vargas JE.

PLoS One. 2015 Jun 30;10(6):e0131211. doi: 10.1371/journal.pone.0131211. eCollection 2015.


Admixture mapping of tuberculosis and pigmentation-related traits in an African-European hybrid cattle population.

Kassahun Y, Mattiangeli V, Ameni G, Hailu E, Aseffa A, Young DB, Hewinson RG, Vordermeier HM, Bradley DG.

Front Genet. 2015 Jun 15;6:210. doi: 10.3389/fgene.2015.00210. eCollection 2015.


A Generalized Sequential Bonferroni Procedure for GWAS in Admixed Populations Incorporating Admixture Mapping Information into Association Tests.

Chen W, Ren C, Qin H, Archer KJ, Ouyang W, Liu N, Chen X, Luo X, Zhu X, Sun S, Gao G.

Hum Hered. 2015 Jun 13;79(2):80-92. [Epub ahead of print]


Development of diagnostic microsatellite markers from whole-genome sequences of Ammodramus sparrows for assessing admixture in a hybrid zone.

Kovach AI, Walsh J, Ramsdell J, Kelley Thomas W.

Ecol Evol. 2015 Jun;5(11):2267-83. doi: 10.1002/ece3.1514. Epub 2015 May 13.


Adapt-Mix: learning local genetic correlation structure improves summary statistics-based analyses.

Park DS, Brown B, Eng C, Huntsman S, Hu D, Torgerson DG, Burchard EG, Zaitlen N.

Bioinformatics. 2015 Jun 15;31(12):i181-i189. doi: 10.1093/bioinformatics/btv230.


simMSG: an experimental design tool for high-throughput genotyping of hybrids.

Schumer M, Cui R, Rosenthal GG, Andolfatto P.

Mol Ecol Resour. 2015 May 28. doi: 10.1111/1755-0998.12434. [Epub ahead of print]


Admixture mapping of coronary artery calcification in African Americans from the NHLBI family heart study.

Gomez F, Wang L, Abel H, Zhang Q, Province MA, Borecki IB.

BMC Genet. 2015 Apr 23;16:42. doi: 10.1186/s12863-015-0196-x.


ALDsuite: Dense marker MALD using principal components of ancestral linkage disequilibrium.

Johnson RC, Nelson GW, Zagury JF, Winkler CA.

BMC Genet. 2015 Mar 7;16:23. doi: 10.1186/s12863-015-0179-y.


Reduced SNP panels for genetic identification and introgression analysis in the dark honey bee (Apis mellifera mellifera).

Muñoz I, Henriques D, Johnston JS, Chávez-Galarza J, Kryger P, Pinto MA.

PLoS One. 2015 Apr 13;10(4):e0124365. doi: 10.1371/journal.pone.0124365. eCollection 2015.


Fast and accurate construction of ultra-dense consensus genetic maps using evolution strategy optimization.

Mester D, Ronin Y, Schnable P, Aluru S, Korol A.

PLoS One. 2015 Apr 13;10(4):e0122485. doi: 10.1371/journal.pone.0122485. eCollection 2015.


A rapid screening of ancestry for genetic association studies in an admixed population from Pernambuco, Brazil.

Coelho AV, Moura RR, Cavalcanti CA, Guimarães RL, Sandrin-Garcia P, Crovella S, Brandão LA.

Genet Mol Res. 2015 Mar 31;14(1):2876-84. doi: 10.4238/2015.March.31.18.


Reconstructing Past Admixture Processes from Local Genomic Ancestry Using Wavelet Transformation.

Sanderson J, Sudoyo H, Karafet TM, Hammer MF, Cox MP.

Genetics. 2015 Jun;200(2):469-81. doi: 10.1534/genetics.115.176842. Epub 2015 Apr 7.


A Systematic Review of Loss-of-Heterozygosity based Topographic Genotyping with PathfinderTG® [Internet].

Trikalinos TA, Terasawa T, Raman G, Ip S, Lau J.

Rockville (MD): Agency for Healthcare Research and Quality (US); 2010 Mar 01.


Genome-wide insights into the genetic history of human populations.

Pugach I, Stoneking M.

Investig Genet. 2015 Apr 1;6:6. doi: 10.1186/s13323-015-0024-0. eCollection 2015.


A single-tube 27-plex SNP assay for estimating individual ancestry and admixture from three continents.

Wei YL, Wei L, Zhao L, Sun QF, Jiang L, Zhang T, Liu HB, Chen JG, Ye J, Hu L, Li CX.

Int J Legal Med. 2015 Apr 2. [Epub ahead of print]


A genomic portrait of haplotype diversity and signatures of selection in indigenous southern African populations.

Chimusa ER, Meintjies A, Tchanga M, Mulder N, Seioghe C, Soodyall H, Ramesar R.

PLoS Genet. 2015 Mar 26;11(3):e1005052. doi: 10.1371/journal.pgen.1005052. eCollection 2015 Mar.


Unravelling the hidden ancestry of American admixed populations.

Montinaro F, Busby GB, Pascali VL, Myers S, Hellenthal G, Capelli C.

Nat Commun. 2015 Mar 24;6:6596. doi: 10.1038/ncomms7596.


Ancestry informative markers for distinguishing between Thai populations based on genome-wide association datasets.

Vongpaisarnsin K, Listman JB, Malison RT, Gelernter J.

Leg Med (Tokyo). 2015 Jul;17(4):245-50. doi: 10.1016/j.legalmed.2015.02.004. Epub 2015 Feb 25.


Genotype imputation accuracy with different reference panels in admixed populations.

Huang GH, Tseng YC.

BMC Proc. 2014 Jun 17;8(Suppl 1 Genetic Analysis Workshop 18Vanessa Olmo):S64. doi: 10.1186/1753-6561-8-S1-S64. eCollection 2014.

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