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Results: 1 to 20 of 151

1.

Origin and evolution of eukaryotic large nucleo-cytoplasmic DNA viruses.

Koonin EV, Yutin N.

Intervirology. 2010;53(5):284-92. doi: 10.1159/000312913. Epub 2010 Jun 15.

PMID:
20551680
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Hidden evolutionary complexity of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes.

Yutin N, Koonin EV.

Virol J. 2012 Aug 14;9:161. doi: 10.1186/1743-422X-9-161.

PMID:
22891861
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution.

Yutin N, Wolf YI, Raoult D, Koonin EV.

Virol J. 2009 Dec 17;6:223. doi: 10.1186/1743-422X-6-223.

PMID:
20017929
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Evolutionary genomics of nucleo-cytoplasmic large DNA viruses.

Iyer LM, Balaji S, Koonin EV, Aravind L.

Virus Res. 2006 Apr;117(1):156-84. Epub 2006 Feb 21. Review.

PMID:
16494962
[PubMed - indexed for MEDLINE]
5.

Evolution of DNA ligases of nucleo-cytoplasmic large DNA viruses of eukaryotes: a case of hidden complexity.

Yutin N, Koonin EV.

Biol Direct. 2009 Dec 18;4:51. doi: 10.1186/1745-6150-4-51.

PMID:
20021668
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Phylogenetic evidence for extensive lateral acquisition of cellular genes by Nucleocytoplasmic large DNA viruses.

Filée J, Pouget N, Chandler M.

BMC Evol Biol. 2008 Nov 26;8:320. doi: 10.1186/1471-2148-8-320.

PMID:
19036122
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Convergent mechanisms of genome evolution of large and giant DNA viruses.

Filée J, Chandler M.

Res Microbiol. 2008 Jun;159(5):325-31. doi: 10.1016/j.resmic.2008.04.012. Epub 2008 May 10.

PMID:
18572389
[PubMed - indexed for MEDLINE]
8.

Gene exchange and the origin of giant viruses.

Filée J, Chandler M.

Intervirology. 2010;53(5):354-61. doi: 10.1159/000312920. Epub 2010 Jun 15. Review.

PMID:
20551687
[PubMed - indexed for MEDLINE]
9.

Widespread horizontal gene transfer from circular single-stranded DNA viruses to eukaryotic genomes.

Liu H, Fu Y, Li B, Yu X, Xie J, Cheng J, Ghabrial SA, Li G, Yi X, Jiang D.

BMC Evol Biol. 2011 Sep 26;11:276. doi: 10.1186/1471-2148-11-276.

PMID:
21943216
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

"Megavirales", a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses.

Colson P, De Lamballerie X, Yutin N, Asgari S, Bigot Y, Bideshi DK, Cheng XW, Federici BA, Van Etten JL, Koonin EV, La Scola B, Raoult D.

Arch Virol. 2013 Dec;158(12):2517-21. doi: 10.1007/s00705-013-1768-6. Epub 2013 Jun 29.

PMID:
23812617
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Mimiviridae: clusters of orthologous genes, reconstruction of gene repertoire evolution and proposed expansion of the giant virus family.

Yutin N, Colson P, Raoult D, Koonin EV.

Virol J. 2013 Apr 4;10:106. doi: 10.1186/1743-422X-10-106.

PMID:
23557328
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Lateral gene transfer, lineage-specific gene expansion and the evolution of Nucleo Cytoplasmic Large DNA viruses.

Filée J.

J Invertebr Pathol. 2009 Jul;101(3):169-71. doi: 10.1016/j.jip.2009.03.010. Epub 2009 May 18. Review.

PMID:
19457437
[PubMed - indexed for MEDLINE]
13.

I am what I eat and I eat what I am: acquisition of bacterial genes by giant viruses.

Filée J, Siguier P, Chandler M.

Trends Genet. 2007 Jan;23(1):10-5. Epub 2006 Nov 15.

PMID:
17109990
[PubMed - indexed for MEDLINE]
14.

The ancient Virus World and evolution of cells.

Koonin EV, Senkevich TG, Dolja VV.

Biol Direct. 2006 Sep 19;1:29.

PMID:
16984643
[PubMed]
Free PMC Article
15.

Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes.

Hingamp P, Grimsley N, Acinas SG, Clerissi C, Subirana L, Poulain J, Ferrera I, Sarmento H, Villar E, Lima-Mendez G, Faust K, Sunagawa S, Claverie JM, Moreau H, Desdevises Y, Bork P, Raes J, de Vargas C, Karsenti E, Kandels-Lewis S, Jaillon O, Not F, Pesant S, Wincker P, Ogata H.

ISME J. 2013 Sep;7(9):1678-95. doi: 10.1038/ismej.2013.59. Epub 2013 Apr 11.

PMID:
23575371
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A selective barrier to horizontal gene transfer in the T4-type bacteriophages that has preserved a core genome with the viral replication and structural genes.

Filée J, Bapteste E, Susko E, Krisch HM.

Mol Biol Evol. 2006 Sep;23(9):1688-96. Epub 2006 Jun 16.

PMID:
16782763
[PubMed - indexed for MEDLINE]
Free Article
17.

The giant Cafeteria roenbergensis virus that infects a widespread marine phagocytic protist is a new member of the fourth domain of Life.

Colson P, Gimenez G, Boyer M, Fournous G, Raoult D.

PLoS One. 2011 Apr 29;6(4):e18935. doi: 10.1371/journal.pone.0018935.

PMID:
21559486
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Potential use of host-derived genome signatures to root virus phylogenies.

Simmons MP.

Mol Phylogenet Evol. 2008 Dec;49(3):969-78. doi: 10.1016/j.ympev.2008.08.014. Epub 2008 Aug 29.

PMID:
18793737
[PubMed - indexed for MEDLINE]
19.

Gene repertoire of amoeba-associated giant viruses.

Colson P, Raoult D.

Intervirology. 2010;53(5):330-43. doi: 10.1159/000312918. Epub 2010 Jun 15. Review.

PMID:
20551685
[PubMed - indexed for MEDLINE]
20.

Route of NCLDV evolution: the genomic accordion.

Filée J.

Curr Opin Virol. 2013 Oct;3(5):595-9. doi: 10.1016/j.coviro.2013.07.003. Epub 2013 Jul 27. Review.

PMID:
23896278
[PubMed - indexed for MEDLINE]

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