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Results: 1 to 20 of 92

Similar articles for PubMed (Select 20444302)

1.

Graph methods for the investigation of metabolic networks in parasitology.

Cottret L, Jourdan F.

Parasitology. 2010 Aug;137(9):1393-407. doi: 10.1017/S0031182010000363. Epub 2010 May 6. Review.

PMID:
20444302
2.

Network synchronizability analysis: a graph-theoretic approach.

Chen G, Duan Z.

Chaos. 2008 Sep;18(3):037102. doi: 10.1063/1.2965530.

PMID:
19045476
3.

Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns.

Kaleta C, de Figueiredo LF, Schuster S.

Genome Res. 2009 Oct;19(10):1872-83. doi: 10.1101/gr.090639.108. Epub 2009 Jun 18.

4.

[Progress in genome-scale metabolic network: a review].

Wang H, Ma H, Zhao X.

Sheng Wu Gong Cheng Xue Bao. 2010 Oct;26(10):1340-8. Review. Chinese.

PMID:
21218620
5.

Metabolic networks: beyond the graph.

Bernal A, Daza E.

Curr Comput Aided Drug Des. 2011 Jun;7(2):122-32. Review.

PMID:
21539508
6.

Flux balance analysis: a geometric perspective.

Smallbone K, Simeonidis E.

J Theor Biol. 2009 May 21;258(2):311-5. doi: 10.1016/j.jtbi.2009.01.027. Epub 2009 Feb 7.

PMID:
19490860
7.

Metabolic networks are NP-hard to reconstruct.

Nikoloski Z, Grimbs S, May P, Selbig J.

J Theor Biol. 2008 Oct 21;254(4):807-16. doi: 10.1016/j.jtbi.2008.07.015. Epub 2008 Jul 22.

PMID:
18682254
8.

An integrative approach towards completing genome-scale metabolic networks.

Christian N, May P, Kempa S, Handorf T, Ebenhöh O.

Mol Biosyst. 2009 Dec;5(12):1889-903. doi: 10.1039/B915913b. Epub 2009 Sep 10.

PMID:
19763335
9.

Metabolite-centric approaches for the discovery of antibacterials using genome-scale metabolic networks.

Kim TY, Kim HU, Lee SY.

Metab Eng. 2010 Mar;12(2):105-11. doi: 10.1016/j.ymben.2009.05.004. Epub 2009 May 28.

PMID:
19481614
10.

The potential of mass spectrometry for the global profiling of parasite metabolomes.

Watson DG.

Parasitology. 2010 Aug;137(9):1409-23. doi: 10.1017/S0031182009991648. Epub 2009 Dec 22. Review.

PMID:
20025826
11.

Dynamic generation and qualitative analysis of metabolic pathways by a joint database/graph theoretical approach.

Ehrentreich F, Schomburg D.

Funct Integr Genomics. 2003 Dec;3(4):189-96. Epub 2003 Oct 16.

PMID:
14564666
12.

[Traditional and innovative diagnostic tools: when and why they should be applied].

Cancrini G, Iori A.

Parassitologia. 2004 Jun;46(1-2):173-6. Review. Italian.

PMID:
15305711
13.

Patterns of interactions of reaction pairs in metabolic networks.

Bruck J, Ebenhöh O, Heinrich R.

Genome Inform. 2006;17(1):208-18.

PMID:
17503370
14.

Implications of the new eukaryotic systematics for parasitologists.

Dacks JB, Walker G, Field MC.

Parasitol Int. 2008 Jun;57(2):97-104. doi: 10.1016/j.parint.2007.11.004. Epub 2007 Dec 4. Review.

PMID:
18180199
15.

Structural analysis of metabolic networks based on flux centrality.

Koschützki D, Junker BH, Schwender J, Schreiber F.

J Theor Biol. 2010 Aug 7;265(3):261-9. doi: 10.1016/j.jtbi.2010.05.009. Epub 2010 May 18.

PMID:
20471988
16.

[Reconstruction and application of genome-scale metabolic network model].

Liu L, Chen J.

Sheng Wu Gong Cheng Xue Bao. 2010 Sep;26(9):1176-86. Chinese.

PMID:
21141107
17.

Using atom mapping rules for an improved detection of relevant routes in weighted metabolic networks.

Blum T, Kohlbacher O.

J Comput Biol. 2008 Jul-Aug;15(6):565-76. doi: 10.1089/cmb.2008.0044.

PMID:
18631021
18.

Recent progress on the analysis of power-law features in complex cellular networks.

Nacher JC, Akutsu T.

Cell Biochem Biophys. 2007;49(1):37-47. Review.

PMID:
17873338
19.

Recent advances in reconstruction and applications of genome-scale metabolic models.

Kim TY, Sohn SB, Kim YB, Kim WJ, Lee SY.

Curr Opin Biotechnol. 2012 Aug;23(4):617-23. doi: 10.1016/j.copbio.2011.10.007. Epub 2011 Nov 4. Review.

PMID:
22054827
20.

Algorithmic and complexity results for decompositions of biological networks into monotone subsystems.

DasGupta B, Enciso GA, Sontag E, Zhang Y.

Biosystems. 2007 Jul-Aug;90(1):161-78. Epub 2006 Aug 12.

PMID:
17188805
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