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Results: 1 to 20 of 87

1.

On finding poorly translated codons based on their usage frequency.

Ponnala L.

Bioinformation. 2009 Sep 5;4(2):63-5.

PMID:
20198170
[PubMed]
Free PMC Article
2.

Codon usage in regulatory genes in Escherichia coli does not reflect selection for 'rare' codons.

Sharp PM, Li WH.

Nucleic Acids Res. 1986 Oct 10;14(19):7737-49.

PMID:
3534792
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Rare codon clusters at 5'-end influence heterologous expression of archaeal gene in Escherichia coli.

Kim S, Lee SB.

Protein Expr Purif. 2006 Nov;50(1):49-57. Epub 2006 Jul 29.

PMID:
16962338
[PubMed - indexed for MEDLINE]
4.

Heterologous protein expression is enhanced by harmonizing the codon usage frequencies of the target gene with those of the expression host.

Angov E, Hillier CJ, Kincaid RL, Lyon JA.

PLoS One. 2008 May 14;3(5):e2189. doi: 10.1371/journal.pone.0002189.

PMID:
18478103
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.

Dong H, Nilsson L, Kurland CG.

J Mol Biol. 1996 Aug 2;260(5):649-63.

PMID:
8709146
[PubMed - indexed for MEDLINE]
6.

Does Escherichia coli optimize the economics of the translation process?

Solomovici J, Lesnik T, Reiss C.

J Theor Biol. 1997 Apr 21;185(4):511-21.

PMID:
9156078
[PubMed - indexed for MEDLINE]
7.

Effects of a minor isoleucyl tRNA on heterologous protein translation in Escherichia coli.

Del Tito BJ Jr, Ward JM, Hodgson J, Gershater CJ, Edwards H, Wysocki LA, Watson FA, Sathe G, Kane JF.

J Bacteriol. 1995 Dec;177(24):7086-91.

PMID:
8522513
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Comparison of codon usage and tRNAs in mitochondrial genomes of Candida species.

Kamatani T, Yamamoto T.

Biosystems. 2007 Sep-Oct;90(2):362-70. Epub 2006 Oct 5.

PMID:
17123703
[PubMed - indexed for MEDLINE]
9.

Coevolution of codon usage and transfer RNA abundance.

Bulmer M.

Nature. 1987 Feb 19-25;325(6106):728-30.

PMID:
2434856
[PubMed - indexed for MEDLINE]
10.
11.

Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis.

Kanaya S, Yamada Y, Kinouchi M, Kudo Y, Ikemura T.

J Mol Evol. 2001 Oct-Nov;53(4-5):290-8.

PMID:
11675589
[PubMed - indexed for MEDLINE]
12.
13.

Optimization protein productivity of human interleukin-2 through codon usage, gene copy number and intracellular tRNA concentration in CHO cells.

Ou KC, Wang CY, Liu KT, Chen YL, Chen YC, Lai MD, Yen MC.

Biochem Biophys Res Commun. 2014 Oct 24;454(2):347-352. doi: 10.1016/j.bbrc.2014.10.097. [Epub ahead of print]

PMID:
25451252
[PubMed - as supplied by publisher]
14.

The influence of anticodon-codon interactions and modified bases on codon usage bias in bacteria.

Ran W, Higgs PG.

Mol Biol Evol. 2010 Sep;27(9):2129-40. doi: 10.1093/molbev/msq102. Epub 2010 Apr 19.

PMID:
20403966
[PubMed - indexed for MEDLINE]
Free Article
15.

Translation efficiencies of synonymous codons for arginine differ dramatically and are not correlated with codon usage in chloroplasts.

Nakamura M, Sugiura M.

Gene. 2011 Feb 1;472(1-2):50-4. doi: 10.1016/j.gene.2010.09.008. Epub 2010 Oct 13.

PMID:
20950677
[PubMed - indexed for MEDLINE]
16.

Translation efficiencies of synonymous codons are not always correlated with codon usage in tobacco chloroplasts.

Nakamura M, Sugiura M.

Plant J. 2007 Jan;49(1):128-34. Epub 2006 Nov 28.

PMID:
17144890
[PubMed - indexed for MEDLINE]
17.

Effects of consecutive AGG codons on translation in Escherichia coli, demonstrated with a versatile codon test system.

Rosenberg AH, Goldman E, Dunn JJ, Studier FW, Zubay G.

J Bacteriol. 1993 Feb;175(3):716-22.

PMID:
7678594
[PubMed - indexed for MEDLINE]
Free PMC Article
18.
19.

Growth-rate-dependent accumulation of twelve tRNA species in Escherichia coli.

Emilsson V, Näslund AK, Kurland CG.

J Mol Biol. 1993 Mar 20;230(2):483-91.

PMID:
7681880
[PubMed - indexed for MEDLINE]
20.

Consecutive low-usage leucine codons block translation only when near the 5' end of a message in Escherichia coli.

Goldman E, Rosenberg AH, Zubay G, Studier FW.

J Mol Biol. 1995 Feb 3;245(5):467-73.

PMID:
7844820
[PubMed - indexed for MEDLINE]

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