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Results: 1 to 20 of 99

1.

Testing clonal relatedness of tumors using array comparative genomic hybridization: a statistical challenge.

Ostrovnaya I, Begg CB.

Clin Cancer Res. 2010 Mar 1;16(5):1358-67. doi: 10.1158/1078-0432.CCR-09-2398. Epub 2010 Feb 23.

PMID:
20179213
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Genomic and mutational profiling to assess clonal relationships between multiple non-small cell lung cancers.

Girard N, Ostrovnaya I, Lau C, Park B, Ladanyi M, Finley D, Deshpande C, Rusch V, Orlow I, Travis WD, Pao W, Begg CB.

Clin Cancer Res. 2009 Aug 15;15(16):5184-90. doi: 10.1158/1078-0432.CCR-09-0594. Epub 2009 Aug 11.

PMID:
19671847
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genomic profiling of oral squamous cell carcinoma by array-based comparative genomic hybridization.

Yoshioka S, Tsukamoto Y, Hijiya N, Nakada C, Uchida T, Matsuura K, Takeuchi I, Seto M, Kawano K, Moriyama M.

PLoS One. 2013;8(2):e56165. doi: 10.1371/journal.pone.0056165. Epub 2013 Feb 14.

PMID:
23457519
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Bladder cancer stage and outcome by array-based comparative genomic hybridization.

Blaveri E, Brewer JL, Roydasgupta R, Fridlyand J, DeVries S, Koppie T, Pejavar S, Mehta K, Carroll P, Simko JP, Waldman FM.

Clin Cancer Res. 2005 Oct 1;11(19 Pt 1):7012-22.

PMID:
16203795
[PubMed - indexed for MEDLINE]
Free Article
5.

A genomic and transcriptomic approach for a differential diagnosis between primary and secondary ovarian carcinomas in patients with a previous history of breast cancer.

Meyniel JP, Cottu PH, Decraene C, Stern MH, Couturier J, Lebigot I, Nicolas A, Weber N, Fourchotte V, Alran S, Rapinat A, Gentien D, Roman-Roman S, Mignot L, Sastre-Garau X.

BMC Cancer. 2010 May 21;10:222. doi: 10.1186/1471-2407-10-222.

PMID:
20492709
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Robust unmixing of tumor states in array comparative genomic hybridization data.

Tolliver D, Tsourakakis C, Subramanian A, Shackney S, Schwartz R.

Bioinformatics. 2010 Jun 15;26(12):i106-14. doi: 10.1093/bioinformatics/btq213.

PMID:
20529894
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Distance-based clustering of CGH data.

Liu J, Mohammed J, Carter J, Ranka S, Kahveci T, Baudis M.

Bioinformatics. 2006 Aug 15;22(16):1971-8. Epub 2006 May 16.

PMID:
16705014
[PubMed - indexed for MEDLINE]
Free Article
8.

Copy number alterations in small intestinal neuroendocrine tumors determined by array comparative genomic hybridization.

Hashemi J, Fotouhi O, Sulaiman L, Kjellman M, Höög A, Zedenius J, Larsson C.

BMC Cancer. 2013 Oct 29;13:505. doi: 10.1186/1471-2407-13-505.

PMID:
24165089
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Tiling array-CGH for the assessment of genomic similarities among synchronous unilateral and bilateral invasive breast cancer tumor pairs.

Brommesson S, Jönsson G, Strand C, Grabau D, Malmström P, Ringnér M, Fernö M, Hedenfalk I.

BMC Clin Pathol. 2008 Jul 10;8:6. doi: 10.1186/1472-6890-8-6.

PMID:
18616792
[PubMed]
Free PMC Article
10.

Integrative analysis of array-comparative genomic hybridisation and matched gene expression profiling data reveals novel genes with prognostic significance in oesophageal adenocarcinoma.

Goh XY, Rees JR, Paterson AL, Chin SF, Marioni JC, Save V, O'Donovan M, Eijk PP, Alderson D, Ylstra B, Caldas C, Fitzgerald RC.

Gut. 2011 Oct;60(10):1317-26. doi: 10.1136/gut.2010.234179. Epub 2011 Apr 8.

PMID:
21478220
[PubMed - indexed for MEDLINE]
11.

Estimation of tumor heterogeneity using CGH array data.

Wang K, Li J, Li S, Bolund L, Wiuf C.

BMC Bioinformatics. 2009 Jan 9;10:12. doi: 10.1186/1471-2105-10-12.

PMID:
19134174
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genomic subtypes of breast cancer identified by array-comparative genomic hybridization display distinct molecular and clinical characteristics.

Jönsson G, Staaf J, Vallon-Christersson J, Ringnér M, Holm K, Hegardt C, Gunnarsson H, Fagerholm R, Strand C, Agnarsson BA, Kilpivaara O, Luts L, Heikkilä P, Aittomäki K, Blomqvist C, Loman N, Malmström P, Olsson H, Johannsson OT, Arason A, Nevanlinna H, Barkardottir RB, Borg A.

Breast Cancer Res. 2010;12(3):R42. doi: 10.1186/bcr2596. Epub 2010 Jun 24.

PMID:
20576095
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Combining Pareto-optimal clusters using supervised learning for identifying co-expressed genes.

Maulik U, Mukhopadhyay A, Bandyopadhyay S.

BMC Bioinformatics. 2009 Jan 20;10:27. doi: 10.1186/1471-2105-10-27.

PMID:
19154590
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genomic profiling and identification of high-risk uveal melanoma by array CGH analysis of primary tumors and liver metastases.

Trolet J, Hupé P, Huon I, Lebigot I, Decraene C, Delattre O, Sastre-Garau X, Saule S, Thiéry JP, Plancher C, Asselain B, Desjardins L, Mariani P, Piperno-Neumann S, Barillot E, Couturier J.

Invest Ophthalmol Vis Sci. 2009 Jun;50(6):2572-80. doi: 10.1167/iovs.08-2296. Epub 2009 Jan 17.

PMID:
19151381
[PubMed - indexed for MEDLINE]
Free Article
15.

Identification of prefoldin amplification (1q23.3-q24.1) in bladder cancer using comparative genomic hybridization (CGH) arrays of urinary DNA.

López V, González-Peramato P, Suela J, Serrano A, Algaba F, Cigudosa JC, Vidal A, Bellmunt J, Heredero O, Sánchez-Carbayo M.

J Transl Med. 2013 Aug 1;11:182. doi: 10.1186/1479-5876-11-182.

PMID:
23914742
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Specific genomic aberrations in primary colorectal cancer are associated with liver metastases.

Bruin SC, Klijn C, Liefers GJ, Braaf LM, Joosse SA, van Beers EH, Verwaal VJ, Morreau H, Wessels LF, van Velthuysen ML, Tollenaar RA, Van't Veer LJ.

BMC Cancer. 2010 Dec 2;10:662. doi: 10.1186/1471-2407-10-662.

PMID:
21126340
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

A non-BRCA1/2 hereditary breast cancer sub-group defined by aCGH profiling of genetically related patients.

Didraga MA, van Beers EH, Joosse SA, Brandwijk KI, Oldenburg RA, Wessels LF, Hogervorst FB, Ligtenberg MJ, Hoogerbrugge N, Verhoef S, Devilee P, Nederlof PM.

Breast Cancer Res Treat. 2011 Nov;130(2):425-36. doi: 10.1007/s10549-011-1357-x. Epub 2011 Feb 1.

PMID:
21286804
[PubMed - indexed for MEDLINE]
18.

Integrated genomic and gene expression profiling identifies two major genomic circuits in urothelial carcinoma.

Lindgren D, Sjödahl G, Lauss M, Staaf J, Chebil G, Lövgren K, Gudjonsson S, Liedberg F, Patschan O, Månsson W, Fernö M, Höglund M.

PLoS One. 2012;7(6):e38863. doi: 10.1371/journal.pone.0038863. Epub 2012 Jun 7.

PMID:
22685613
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

High-resolution aCGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer.

Chin SF, Teschendorff AE, Marioni JC, Wang Y, Barbosa-Morais NL, Thorne NP, Costa JL, Pinder SE, van de Wiel MA, Green AR, Ellis IO, Porter PL, Tavaré S, Brenton JD, Ylstra B, Caldas C.

Genome Biol. 2007;8(10):R215.

PMID:
17925008
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Spatial clustering of array CGH features in combination with hierarchical multiple testing.

Kim KI, Roquain E, van de Wiel MA.

Stat Appl Genet Mol Biol. 2010;9:Article40. doi: 10.2202/1544-6115.1532. Epub 2010 Nov 16.

PMID:
21126231
[PubMed - indexed for MEDLINE]
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