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Items: 1 to 20 of 138

1.

Accurate SNP and mutation detection by targeted custom microarray-based genomic enrichment of short-fragment sequencing libraries.

Mokry M, Feitsma H, Nijman IJ, de Bruijn E, van der Zaag PJ, Guryev V, Cuppen E.

Nucleic Acids Res. 2010 Jun;38(10):e116. doi: 10.1093/nar/gkq072. Epub 2010 Feb 17.

2.

Massively parallel sequencing of ataxia genes after array-based enrichment.

Hoischen A, Gilissen C, Arts P, Wieskamp N, van der Vliet W, Vermeer S, Steehouwer M, de Vries P, Meijer R, Seiqueros J, Knoers NV, Buckley MF, Scheffer H, Veltman JA.

Hum Mutat. 2010 Apr;31(4):494-9. doi: 10.1002/humu.21221.

PMID:
20151403
3.

Accurate detection and genotyping of SNPs utilizing population sequencing data.

Bansal V, Harismendy O, Tewhey R, Murray SS, Schork NJ, Topol EJ, Frazer KA.

Genome Res. 2010 Apr;20(4):537-45. doi: 10.1101/gr.100040.109. Epub 2010 Feb 11.

4.

Performance of microarray and liquid based capture methods for target enrichment for massively parallel sequencing and SNP discovery.

Kiialainen A, Karlberg O, Ahlford A, Sigurdsson S, Lindblad-Toh K, Syvänen AC.

PLoS One. 2011 Feb 9;6(2):e16486. doi: 10.1371/journal.pone.0016486.

5.

Microarray-based multicycle-enrichment of genomic subsets for targeted next-generation sequencing.

Summerer D, Wu H, Haase B, Cheng Y, Schracke N, Stähler CF, Chee MS, Stähler PF, Beier M.

Genome Res. 2009 Sep;19(9):1616-21. doi: 10.1101/gr.091942.109. Epub 2009 Jul 28.

6.

Population-based rare variant detection via pooled exome or custom hybridization capture with or without individual indexing.

Ramos E, Levinson BT, Chasnoff S, Hughes A, Young AL, Thornton K, Li A, Vallania FL, Province M, Druley TE.

BMC Genomics. 2012 Dec 6;13:683. doi: 10.1186/1471-2164-13-683.

8.

Targeted high throughput sequencing of a cancer-related exome subset by specific sequence capture with a fully automated microarray platform.

Summerer D, Schracke N, Wu H, Cheng Y, Bau S, Stähler CF, Stähler PF, Beier M.

Genomics. 2010 Apr;95(4):241-6. doi: 10.1016/j.ygeno.2010.01.006. Epub 2010 Feb 6.

9.

DNA sequence capture and enrichment by microarray followed by next-generation sequencing for targeted resequencing: neurofibromatosis type 1 gene as a model.

Chou LS, Liu CS, Boese B, Zhang X, Mao R.

Clin Chem. 2010 Jan;56(1):62-72. doi: 10.1373/clinchem.2009.132639. Epub 2009 Nov 12.

11.

Comparison of solution-based exome capture methods for next generation sequencing.

Sulonen AM, Ellonen P, Almusa H, Lepistö M, Eldfors S, Hannula S, Miettinen T, Tyynismaa H, Salo P, Heckman C, Joensuu H, Raivio T, Suomalainen A, Saarela J.

Genome Biol. 2011 Sep 28;12(9):R94. doi: 10.1186/gb-2011-12-9-r94.

12.

Next generation sequencing has lower sequence coverage and poorer SNP-detection capability in the regulatory regions.

Wang W, Wei Z, Lam TW, Wang J.

Sci Rep. 2011;1:55. doi: 10.1038/srep00055. Epub 2011 Aug 5.

13.

Multiplexed array-based and in-solution genomic enrichment for flexible and cost-effective targeted next-generation sequencing.

Harakalova M, Mokry M, Hrdlickova B, Renkens I, Duran K, van Roekel H, Lansu N, van Roosmalen M, de Bruijn E, Nijman IJ, Kloosterman WP, Cuppen E.

Nat Protoc. 2011 Nov 3;6(12):1870-86. doi: 10.1038/nprot.2011.396.

PMID:
22051800
14.

Exome sequencing of a multigenerational human pedigree.

Hedges DJ, Burges D, Powell E, Almonte C, Huang J, Young S, Boese B, Schmidt M, Pericak-Vance MA, Martin E, Zhang X, Harkins TT, Züchner S.

PLoS One. 2009 Dec 14;4(12):e8232. doi: 10.1371/journal.pone.0008232. Erratum in: PLoS One. 2009;4(12). doi: 10.1371/annotation/b0fe9dd5-16e1-4b50-b590-263518fbd5eb. Hedges, Dale [corrected to Hedges, Dale J].

15.

Repeat subtraction-mediated sequence capture from a complex genome.

Fu Y, Springer NM, Gerhardt DJ, Ying K, Yeh CT, Wu W, Swanson-Wagner R, D'Ascenzo M, Millard T, Freeberg L, Aoyama N, Kitzman J, Burgess D, Richmond T, Albert TJ, Barbazuk WB, Jeddeloh JA, Schnable PS.

Plant J. 2010 Jun 1;62(5):898-909. doi: 10.1111/j.1365-313X.2010.04196.x. Epub 2010 Mar 4.

16.

Combining microarray-based genomic selection (MGS) with the Illumina Genome Analyzer platform to sequence diploid target regions.

Okou DT, Locke AE, Steinberg KM, Hagen K, Athri P, Shetty AC, Patel V, Zwick ME.

Ann Hum Genet. 2009 Sep;73(Pt 5):502-13. doi: 10.1111/j.1469-1809.2009.00530.x. Epub 2009 Jul 1.

17.

Improving the efficiency of genomic loci capture using oligonucleotide arrays for high throughput resequencing.

Lee H, O'Connor BD, Merriman B, Funari VA, Homer N, Chen Z, Cohn DH, Nelson SF.

BMC Genomics. 2009 Dec 31;10:646. doi: 10.1186/1471-2164-10-646.

18.

High-performance single-chip exon capture allows accurate whole exome sequencing using the Illumina Genome Analyzer.

Jiang T, Yang L, Jiang H, Tian G, Zhang X.

Sci China Life Sci. 2011 Oct;54(10):945-52. doi: 10.1007/s11427-011-4232-4. Epub 2011 Oct 29.

PMID:
22038007
19.

Direct selection of human genomic loci by microarray hybridization.

Albert TJ, Molla MN, Muzny DM, Nazareth L, Wheeler D, Song X, Richmond TA, Middle CM, Rodesch MJ, Packard CJ, Weinstock GM, Gibbs RA.

Nat Methods. 2007 Nov;4(11):903-5. Epub 2007 Oct 14.

PMID:
17934467
20.

Targeted multiplex next-generation sequencing: advances in techniques of mitochondrial and nuclear DNA sequencing for population genomics.

Hancock-Hanser BL, Frey A, Leslie MS, Dutton PH, Archer FI, Morin PA.

Mol Ecol Resour. 2013 Mar;13(2):254-68. doi: 10.1111/1755-0998.12059. Epub 2013 Jan 25.

PMID:
23351075
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