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Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana.

Vidal EA, Araus V, Lu C, Parry G, Green PJ, Coruzzi GM, Gutiérrez RA.

Proc Natl Acad Sci U S A. 2010 Mar 2;107(9):4477-82. doi: 10.1073/pnas.0909571107. Epub 2010 Feb 8.


Systems approaches map regulatory networks downstream of the auxin receptor AFB3 in the nitrate response of Arabidopsis thaliana roots.

Vidal EA, Moyano TC, Riveras E, Contreras-López O, Gutiérrez RA.

Proc Natl Acad Sci U S A. 2013 Jul 30;110(31):12840-5. doi: 10.1073/pnas.1310937110. Epub 2013 Jul 11.


Regulation of auxin response by miR393-targeted transport inhibitor response protein 1 is involved in normal development in Arabidopsis.

Chen ZH, Bao ML, Sun YZ, Yang YJ, Xu XH, Wang JH, Han N, Bian HW, Zhu MY.

Plant Mol Biol. 2011 Dec;77(6):619-29. doi: 10.1007/s11103-011-9838-1. Epub 2011 Nov 1.


Overexpression of a miR393-resistant form of transport inhibitor response protein 1 (mTIR1) enhances salt tolerance by increased osmoregulation and Na+ exclusion in Arabidopsis thaliana.

Chen Z, Hu L, Han N, Hu J, Yang Y, Xiang T, Zhang X, Wang L.

Plant Cell Physiol. 2015 Jan;56(1):73-83. doi: 10.1093/pcp/pcu149. Epub 2014 Oct 21.


Nitrate regulation of AFB3 and NAC4 gene expression in Arabidopsis roots depends on NRT1.1 nitrate transport function.

Vidal EA, Álvarez JM, Gutiérrez RA.

Plant Signal Behav. 2014;9(3):e28501. Epub 2014 Jan 1.


Complex regulation of the TIR1/AFB family of auxin receptors.

Parry G, Calderon-Villalobos LI, Prigge M, Peret B, Dharmasiri S, Itoh H, Lechner E, Gray WM, Bennett M, Estelle M.

Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22540-5. doi: 10.1073/pnas.0911967106. Epub 2009 Dec 16.


MiR393 regulation of auxin signaling and redox-related components during acclimation to salinity in Arabidopsis.

Iglesias MJ, Terrile MC, Windels D, Lombardo MC, Bartoli CG, Vazquez F, Estelle M, Casalongué CA.

PLoS One. 2014 Sep 15;9(9):e107678. doi: 10.1371/journal.pone.0107678. eCollection 2014.


A central role for the nitrate transporter NRT2.1 in the integrated morphological and physiological responses of the root system to nitrogen limitation in Arabidopsis.

Remans T, Nacry P, Pervent M, Girin T, Tillard P, Lepetit M, Gojon A.

Plant Physiol. 2006 Mar;140(3):909-21. Epub 2006 Jan 13.


Chitinase-like protein CTL1 plays a role in altering root system architecture in response to multiple environmental conditions.

Hermans C, Porco S, Verbruggen N, Bush DR.

Plant Physiol. 2010 Feb;152(2):904-17. doi: 10.1104/pp.109.149849. Epub 2009 Dec 9.


miR396a-Mediated basic helix-loop-helix transcription factor bHLH74 repression acts as a regulator for root growth in Arabidopsis seedlings.

Bao M, Bian H, Zha Y, Li F, Sun Y, Bai B, Chen Z, Wang J, Zhu M, Han N.

Plant Cell Physiol. 2014 Jul;55(7):1343-53. doi: 10.1093/pcp/pcu058. Epub 2014 May 3.


Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots.

Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA.

BMC Genomics. 2013 Oct 11;14:701. doi: 10.1186/1471-2164-14-701.


Signalling mechanisms underlying the morphological responses of the root system to nitrogen in Arabidopsis thaliana.

Zhang H, Rong H, Pilbeam D.

J Exp Bot. 2007;58(9):2329-38. Epub 2007 Jun 19. Review.


Systems approach identifies TGA1 and TGA4 transcription factors as important regulatory components of the nitrate response of Arabidopsis thaliana roots.

Alvarez JM, Riveras E, Vidal EA, Gras DE, Contreras-López O, Tamayo KP, Aceituno F, Gómez I, Ruffel S, Lejay L, Jordana X, Gutiérrez RA.

Plant J. 2014 Oct;80(1):1-13. doi: 10.1111/tpj.12618. Epub 2014 Aug 25.


miR393 and secondary siRNAs regulate expression of the TIR1/AFB2 auxin receptor clade and auxin-related development of Arabidopsis leaves.

Si-Ammour A, Windels D, Arn-Bouldoires E, Kutter C, Ailhas J, Meins F Jr, Vazquez F.

Plant Physiol. 2011 Oct;157(2):683-91. doi: 10.1104/pp.111.180083. Epub 2011 Aug 9.


The jasmonate receptor COI1 plays a role in jasmonate-induced lateral root formation and lateral root positioning in Arabidopsis thaliana.

Raya-González J, Pelagio-Flores R, López-Bucio J.

J Plant Physiol. 2012 Sep 15;169(14):1348-58. doi: 10.1016/j.jplph.2012.05.002. Epub 2012 Jun 1.


Identification of Arabidopsis mutants impaired in the systemic regulation of root nitrate uptake by the nitrogen status of the plant.

Girin T, El-Kafafi el-S, Widiez T, Erban A, Hubberten HM, Kopka J, Hoefgen R, Gojon A, Lepetit M.

Plant Physiol. 2010 Jul;153(3):1250-60. doi: 10.1104/pp.110.157354. Epub 2010 May 6.


Auxin-mediated nitrate signalling by NRT1.1 participates in the adaptive response of Arabidopsis root architecture to the spatial heterogeneity of nitrate availability.

Mounier E, Pervent M, Ljung K, Gojon A, Nacry P.

Plant Cell Environ. 2014 Jan;37(1):162-74. doi: 10.1111/pce.12143. Epub 2013 Jun 25.


Nutritional regulation of ANR1 and other root-expressed MADS-box genes in Arabidopsis thaliana.

Gan Y, Filleur S, Rahman A, Gotensparre S, Forde BG.

Planta. 2005 Nov;222(4):730-42. Epub 2005 Nov 4.


Nitrate foraging by Arabidopsis roots is mediated by the transcription factor TCP20 through the systemic signaling pathway.

Guan P, Wang R, Nacry P, Breton G, Kay SA, Pruneda-Paz JL, Davani A, Crawford NM.

Proc Natl Acad Sci U S A. 2014 Oct 21;111(42):15267-72. doi: 10.1073/pnas.1411375111. Epub 2014 Oct 6.

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