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Results: 1 to 20 of 103

Similar articles for PubMed (Select 19948773)

1.

Globally, unrelated protein sequences appear random.

Lavelle DT, Pearson WR.

Bioinformatics. 2010 Feb 1;26(3):310-8. doi: 10.1093/bioinformatics/btp660. Epub 2009 Nov 30.

2.

Improving protein secondary structure prediction based on short subsequences with local structure similarity.

Lin HN, Sung TY, Ho SY, Hsu WL.

BMC Genomics. 2010 Dec 2;11 Suppl 4:S4. doi: 10.1186/1471-2164-11-S4-S4.

3.

Mining protein loops using a structural alphabet and statistical exceptionality.

Regad L, Martin J, Nuel G, Camproux AC.

BMC Bioinformatics. 2010 Feb 4;11:75. doi: 10.1186/1471-2105-11-75.

4.

Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models?

Taly JF, Marin A, Gibrat JF.

BMC Bioinformatics. 2008 Jan 7;9:6. doi: 10.1186/1471-2105-9-6.

5.

The size distribution of protein families within different types of folds.

Liu X, Lv B, Guo W.

Biochem Biophys Res Commun. 2011 Mar 11;406(2):218-22. doi: 10.1016/j.bbrc.2011.02.020. Epub 2011 Feb 15.

PMID:
21303659
6.

Protein secondary structure appears to be robust under in silico evolution while protein disorder appears not to be.

Schaefer C, Schlessinger A, Rost B.

Bioinformatics. 2010 Mar 1;26(5):625-31. doi: 10.1093/bioinformatics/btq012. Epub 2010 Jan 16.

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Detection of unrelated proteins in sequences multiple alignments by using predicted secondary structures.

Errami M, Geourjon C, Deléage G.

Bioinformatics. 2003 Mar 1;19(4):506-12.

10.

FORESST: fold recognition from secondary structure predictions of proteins.

Di Francesco V, Munson PJ, Garnier J.

Bioinformatics. 1999 Feb;15(2):131-40.

11.

Recognizing the fold of a protein structure.

Harrison A, Pearl F, Sillitoe I, Slidel T, Mott R, Thornton J, Orengo C.

Bioinformatics. 2003 Sep 22;19(14):1748-59.

12.

Word decoding of protein amino Acid sequences with availability analysis: a linguistic approach.

Motomura K, Fujita T, Tsutsumi M, Kikuzato S, Nakamura M, Otaki JM.

PLoS One. 2012;7(11):e50039. doi: 10.1371/journal.pone.0050039. Epub 2012 Nov 21.

13.

Designability of alpha-helical proteins.

Emberly EG, Wingreen NS, Tang C.

Proc Natl Acad Sci U S A. 2002 Aug 20;99(17):11163-8. Epub 2002 Aug 12.

16.

Predicting alpha-helix and beta-strand segments of globular proteins.

Solovyev VV, Salamov AA.

Comput Appl Biosci. 1994 Dec;10(6):661-9.

PMID:
7704665
18.

Proteins of the same fold and unrelated sequences have similar amino acid composition.

Ofran Y, Margalit H.

Proteins. 2006 Jul 1;64(1):275-9.

PMID:
16565950
19.

Analyses of the general rule on residue pair frequencies in local amino acid sequences of soluble, ordered proteins.

Shirota M, Kinoshita K.

Protein Sci. 2013 Jun;22(6):725-33. doi: 10.1002/pro.2255. Epub 2013 Apr 29.

20.

Tubulin secondary structure analysis, limited proteolysis sites, and homology to FtsZ.

de Pereda JM, Leynadier D, Evangelio JA, Chacón P, Andreu JM.

Biochemistry. 1996 Nov 12;35(45):14203-15.

PMID:
8916905
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