Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 127

1.

A galaxy of folds.

Alva V, Remmert M, Biegert A, Lupas AN, Söding J.

Protein Sci. 2010 Jan;19(1):124-30. doi: 10.1002/pro.297.

PMID:
19937658
[PubMed - indexed for MEDLINE]
Free PMC Article
2.
3.

Identification of homology in protein structure classification.

Dietmann S, Holm L.

Nat Struct Biol. 2001 Nov;8(11):953-7.

PMID:
11685241
[PubMed - indexed for MEDLINE]
4.

On the evolution of protein folds: are similar motifs in different protein folds the result of convergence, insertion, or relics of an ancient peptide world?

Lupas AN, Ponting CP, Russell RB.

J Struct Biol. 2001 May-Jun;134(2-3):191-203. Review.

PMID:
11551179
[PubMed - indexed for MEDLINE]
5.

Protein structural domains: analysis of the 3Dee domains database.

Dengler U, Siddiqui AS, Barton GJ.

Proteins. 2001 Feb 15;42(3):332-44.

PMID:
11151005
[PubMed - indexed for MEDLINE]
6.

Interaction interfaces of protein domains are not topologically equivalent across families within superfamilies: Implications for metabolic and signaling pathways.

Rekha N, Machado SM, Narayanan C, Krupa A, Srinivasan N.

Proteins. 2005 Feb 1;58(2):339-53.

PMID:
15562516
[PubMed - indexed for MEDLINE]
7.

SUPFAM: a database of sequence superfamilies of protein domains.

Pandit SB, Bhadra R, Gowri VS, Balaji S, Anand B, Srinivasan N.

BMC Bioinformatics. 2004 Mar 15;5:28.

PMID:
15113407
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Evolution of outer membrane beta-barrels from an ancestral beta beta hairpin.

Remmert M, Biegert A, Linke D, Lupas AN, Söding J.

Mol Biol Evol. 2010 Jun;27(6):1348-58. doi: 10.1093/molbev/msq017. Epub 2010 Jan 27.

PMID:
20106904
[PubMed - indexed for MEDLINE]
Free Article
9.

Structural classification of small, disulfide-rich protein domains.

Cheek S, Krishna SS, Grishin NV.

J Mol Biol. 2006 May 26;359(1):215-37. Epub 2006 Mar 29.

PMID:
16618491
[PubMed - indexed for MEDLINE]
10.

Sequence conservation in families whose members have little or no sequence similarity: the four-helical cytokines and cytochromes.

Hill EE, Morea V, Chothia C.

J Mol Biol. 2002 Sep 6;322(1):205-33.

PMID:
12215425
[PubMed - indexed for MEDLINE]
11.

AutoSCOP: automated prediction of SCOP classifications using unique pattern-class mappings.

Gewehr JE, Hintermair V, Zimmer R.

Bioinformatics. 2007 May 15;23(10):1203-10. Epub 2007 Mar 22.

PMID:
17379694
[PubMed - indexed for MEDLINE]
Free Article
12.

Protein folds and families: sequence and structure alignments.

Holm L, Sander C.

Nucleic Acids Res. 1999 Jan 1;27(1):244-7.

PMID:
9847191
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The CATH Database provides insights into protein structure/function relationships.

Orengo CA, Pearl FM, Bray JE, Todd AE, Martin AC, Lo Conte L, Thornton JM.

Nucleic Acids Res. 1999 Jan 1;27(1):275-9.

PMID:
9847200
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Evolution of function in protein superfamilies, from a structural perspective.

Todd AE, Orengo CA, Thornton JM.

J Mol Biol. 2001 Apr 6;307(4):1113-43.

PMID:
11286560
[PubMed - indexed for MEDLINE]
15.

Functional fingerprints of folds: evidence for correlated structure-function evolution.

Shakhnovich BE, Dokholyan NV, DeLisi C, Shakhnovich EI.

J Mol Biol. 2003 Feb 7;326(1):1-9.

PMID:
12547186
[PubMed - indexed for MEDLINE]
16.

Protein fold similarity estimated by a probabilistic approach based on C(alpha)-C(alpha) distance comparison.

Carugo O, Pongor S.

J Mol Biol. 2002 Jan 25;315(4):887-98.

PMID:
11812155
[PubMed - indexed for MEDLINE]
17.

Distant homology recognition using structural classification of proteins.

Murzin AG, Bateman A.

Proteins. 1997;Suppl 1:105-12.

PMID:
9485501
[PubMed - indexed for MEDLINE]
18.

Natural history of S-adenosylmethionine-binding proteins.

Kozbial PZ, Mushegian AR.

BMC Struct Biol. 2005 Oct 14;5:19.

PMID:
16225687
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Three-dimensional cluster analysis identifies interfaces and functional residue clusters in proteins.

Landgraf R, Xenarios I, Eisenberg D.

J Mol Biol. 2001 Apr 13;307(5):1487-502.

PMID:
11292355
[PubMed - indexed for MEDLINE]
20.

Touring protein fold space with Dali/FSSP.

Holm L, Sander C.

Nucleic Acids Res. 1998 Jan 1;26(1):316-9.

PMID:
9399863
[PubMed - indexed for MEDLINE]
Free PMC Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk