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Results: 1 to 20 of 103

1.

A single molecule scaffold for the maize genome.

Zhou S, Wei F, Nguyen J, Bechner M, Potamousis K, Goldstein S, Pape L, Mehan MR, Churas C, Pasternak S, Forrest DK, Wise R, Ware D, Wing RA, Waterman MS, Livny M, Schwartz DC.

PLoS Genet. 2009 Nov;5(11):e1000711. doi: 10.1371/journal.pgen.1000711. Epub 2009 Nov 20.

PMID:
19936062
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The physical and genetic framework of the maize B73 genome.

Wei F, Zhang J, Zhou S, He R, Schaeffer M, Collura K, Kudrna D, Faga BP, Wissotski M, Golser W, Rock SM, Graves TA, Fulton RS, Coe E, Schnable PS, Schwartz DC, Ware D, Clifton SW, Wilson RK, Wing RA.

PLoS Genet. 2009 Nov;5(11):e1000715. doi: 10.1371/journal.pgen.1000715. Epub 2009 Nov 20.

PMID:
19936061
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Generation of a BAC-based physical map of the melon genome.

González VM, Garcia-Mas J, Arús P, Puigdomènech P.

BMC Genomics. 2010 May 28;11:339. doi: 10.1186/1471-2164-11-339.

PMID:
20509895
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.

Gu YQ, Ma Y, Huo N, Vogel JP, You FM, Lazo GR, Nelson WM, Soderlund C, Dvorak J, Anderson OD, Luo MC.

BMC Genomics. 2009 Oct 27;10:496. doi: 10.1186/1471-2164-10-496.

PMID:
19860896
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

LTC: a novel algorithm to improve the efficiency of contig assembly for physical mapping in complex genomes.

Frenkel Z, Paux E, Mester D, Feuillet C, Korol A.

BMC Bioinformatics. 2010 Nov 30;11:584. doi: 10.1186/1471-2105-11-584.

PMID:
21118513
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps.

Yim YS, Moak P, Sanchez-Villeda H, Musket TA, Close P, Klein PE, Mullet JE, McMullen MD, Fang Z, Schaeffer ML, Gardiner JM, Coe EH Jr, Davis GL.

BMC Genomics. 2007 Feb 9;8:47.

PMID:
17291341
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Characterization of three maize bacterial artificial chromosome libraries toward anchoring of the physical map to the genetic map using high-density bacterial artificial chromosome filter hybridization.

Yim YS, Davis GL, Duru NA, Musket TA, Linton EW, Messing JW, McMullen MD, Soderlund CA, Polacco ML, Gardiner JM, Coe EH Jr.

Plant Physiol. 2002 Dec;130(4):1686-96.

PMID:
12481051
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

iMap: a database-driven utility to integrate and access the genetic and physical maps of maize.

Fang Z, Cone K, Sanchez-Villeda H, Polacco M, McMullen M, Schroeder S, Gardiner J, Davis G, Havermann S, Yim Y, Vroh Bi I, Coe E.

Bioinformatics. 2003 Nov 1;19(16):2105-11.

PMID:
14594716
[PubMed - indexed for MEDLINE]
Free Article
9.

The first generation of a BAC-based physical map of Brassica rapa.

Mun JH, Kwon SJ, Yang TJ, Kim HS, Choi BS, Baek S, Kim JS, Jin M, Kim JA, Lim MH, Lee SI, Kim HI, Kim H, Lim YP, Park BS.

BMC Genomics. 2008 Jun 12;9:280. doi: 10.1186/1471-2164-9-280.

PMID:
18549474
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Physical mapping and BAC-end sequence analysis provide initial insights into the flax (Linum usitatissimum L.) genome.

Ragupathy R, Rathinavelu R, Cloutier S.

BMC Genomics. 2011 May 9;12:217. doi: 10.1186/1471-2164-12-217.

PMID:
21554714
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A physical map of the highly heterozygous Populus genome: integration with the genome sequence and genetic map and analysis of haplotype variation.

Kelleher CT, Chiu R, Shin H, Bosdet IE, Krzywinski MI, Fjell CD, Wilkin J, Yin T, DiFazio SP, Ali J, Asano JK, Chan S, Cloutier A, Girn N, Leach S, Lee D, Mathewson CA, Olson T, O'connor K, Prabhu AL, Smailus DE, Stott JM, Tsai M, Wye NH, Yang GS, Zhuang J, Holt RA, Putnam NH, Vrebalov J, Giovannoni JJ, Grimwood J, Schmutz J, Rokhsar D, Jones SJ, Marra MA, Tuskan GA, Bohlmann J, Ellis BE, Ritland K, Douglas CJ, Schein JE.

Plant J. 2007 Jun;50(6):1063-78. Epub 2007 May 3.

PMID:
17488239
[PubMed - indexed for MEDLINE]
12.

A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome.

Ganal MW, Durstewitz G, Polley A, Bérard A, Buckler ES, Charcosset A, Clarke JD, Graner EM, Hansen M, Joets J, Le Paslier MC, McMullen MD, Montalent P, Rose M, Schön CC, Sun Q, Walter H, Martin OC, Falque M.

PLoS One. 2011;6(12):e28334. doi: 10.1371/journal.pone.0028334. Epub 2011 Dec 8.

PMID:
22174790
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Sequence-based physical mapping of complex genomes by whole genome profiling.

van Oeveren J, de Ruiter M, Jesse T, van der Poel H, Tang J, Yalcin F, Janssen A, Volpin H, Stormo KE, Bogden R, van Eijk MJ, Prins M.

Genome Res. 2011 Apr;21(4):618-25. doi: 10.1101/gr.112094.110. Epub 2011 Feb 1.

PMID:
21324881
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species.

Luo MC, Ma Y, You FM, Anderson OD, Kopecký D, Simková H, Safár J, Dolezel J, Gill B, McGuire PE, Dvorak J.

BMC Genomics. 2010 Feb 19;11:122. doi: 10.1186/1471-2164-11-122.

PMID:
20170511
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Detailed analysis of a contiguous 22-Mb region of the maize genome.

Wei F, Stein JC, Liang C, Zhang J, Fulton RS, Baucom RS, De Paoli E, Zhou S, Yang L, Han Y, Pasternak S, Narechania A, Zhang L, Yeh CT, Ying K, Nagel DH, Collura K, Kudrna D, Currie J, Lin J, Kim H, Angelova A, Scara G, Wissotski M, Golser W, Courtney L, Kruchowski S, Graves TA, Rock SM, Adams S, Fulton LA, Fronick C, Courtney W, Kramer M, Spiegel L, Nascimento L, Kalyanaraman A, Chaparro C, Deragon JM, Miguel PS, Jiang N, Wessler SR, Green PJ, Yu Y, Schwartz DC, Meyers BC, Bennetzen JL, Martienssen RA, McCombie WR, Aluru S, Clifton SW, Schnable PS, Ware D, Wilson RK, Wing RA.

PLoS Genet. 2009 Nov;5(11):e1000728. doi: 10.1371/journal.pgen.1000728. Epub 2009 Nov 20.

PMID:
19936048
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

An integrated map of Arabidopsis thaliana for functional analysis of its genome sequence.

Chang YL, Tao Q, Scheuring C, Ding K, Meksem K, Zhang HB.

Genetics. 2001 Nov;159(3):1231-42.

PMID:
11729165
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Whole Genome Profiling provides a robust framework for physical mapping and sequencing in the highly complex and repetitive wheat genome.

Philippe R, Choulet F, Paux E, van Oeveren J, Tang J, Wittenberg AH, Janssen A, van Eijk MJ, Stormo K, Alberti A, Wincker P, Akhunov E, van der Vossen E, Feuillet C.

BMC Genomics. 2012 Jan 30;13:47. doi: 10.1186/1471-2164-13-47.

PMID:
22289472
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

A high-throughput AFLP-based method for constructing integrated genetic and physical maps: progress toward a sorghum genome map.

Klein PE, Klein RR, Cartinhour SW, Ulanch PE, Dong J, Obert JA, Morishige DT, Schlueter SD, Childs KL, Ale M, Mullet JE.

Genome Res. 2000 Jun;10(6):789-807.

PMID:
10854411
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Validation of rice genome sequence by optical mapping.

Zhou S, Bechner MC, Place M, Churas CP, Pape L, Leong SA, Runnheim R, Forrest DK, Goldstein S, Livny M, Schwartz DC.

BMC Genomics. 2007 Aug 15;8:278.

PMID:
17697381
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

A high resolution physical and RH map of pig chromosome 6q1.2 and comparative analysis with human chromosome 19q13.1.

Martins-Wess F, Milan D, Drögemüller C, Vobeta-Nemitz R, Brenig B, Robic A, Yerle M, Leeb T.

BMC Genomics. 2003 May 13;4(1):20. Epub 2003 May 13.

PMID:
12744726
[PubMed - indexed for MEDLINE]
Free PMC Article

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