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Results: 1 to 20 of 138

1.

The molecular clockwork of a protein-based circadian oscillator.

Markson JS, O'Shea EK.

FEBS Lett. 2009 Dec 17;583(24):3938-47. doi: 10.1016/j.febslet.2009.11.021. Epub . Review.

PMID:
19913541
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Structural model of the circadian clock KaiB-KaiC complex and mechanism for modulation of KaiC phosphorylation.

Pattanayek R, Williams DR, Pattanayek S, Mori T, Johnson CH, Stewart PL, Egli M.

EMBO J. 2008 Jun 18;27(12):1767-78. doi: 10.1038/emboj.2008.104. Epub 2008 May 22.

PMID:
18497745
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Intermolecular associations determine the dynamics of the circadian KaiABC oscillator.

Qin X, Byrne M, Mori T, Zou P, Williams DR, McHaourab H, Johnson CH.

Proc Natl Acad Sci U S A. 2010 Aug 17;107(33):14805-10. doi: 10.1073/pnas.1002119107. Epub 2010 Aug 2.

PMID:
20679240
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Nature of KaiB-KaiC binding in the cyanobacterial circadian oscillator.

Pattanayek R, Yadagiri KK, Ohi MD, Egli M.

Cell Cycle. 2013 Mar 1;12(5):810-7. doi: 10.4161/cc.23757. Epub 2013 Feb 6.

PMID:
23388462
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

CryoEM and molecular dynamics of the circadian KaiB-KaiC complex indicates that KaiB monomers interact with KaiC and block ATP binding clefts.

Villarreal SA, Pattanayek R, Williams DR, Mori T, Qin X, Johnson CH, Egli M, Stewart PL.

J Mol Biol. 2013 Sep 23;425(18):3311-24. doi: 10.1016/j.jmb.2013.06.018. Epub 2013 Jun 22.

PMID:
23796516
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A sequestration feedback determines dynamics and temperature entrainment of the KaiABC circadian clock.

Brettschneider C, Rose RJ, Hertel S, Axmann IM, Heck AJ, Kollmann M.

Mol Syst Biol. 2010 Jul 13;6:389. doi: 10.1038/msb.2010.44.

PMID:
20631683
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

A cyanobacterial circadian clock based on the Kai oscillator.

Kondo T.

Cold Spring Harb Symp Quant Biol. 2007;72:47-55. doi: 10.1101/sqb.2007.72.029. Review.

PMID:
18419262
[PubMed - indexed for MEDLINE]
8.

Combined SAXS/EM based models of the S. elongatus post-translational circadian oscillator and its interactions with the output His-kinase SasA.

Pattanayek R, Williams DR, Rossi G, Weigand S, Mori T, Johnson CH, Stewart PL, Egli M.

PLoS One. 2011;6(8):e23697. doi: 10.1371/journal.pone.0023697. Epub 2011 Aug 24.

PMID:
21887298
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

The KaiA protein of the cyanobacterial circadian oscillator is modulated by a redox-active cofactor.

Wood TL, Bridwell-Rabb J, Kim YI, Gao T, Chang YG, LiWang A, Barondeau DP, Golden SS.

Proc Natl Acad Sci U S A. 2010 Mar 30;107(13):5804-9. doi: 10.1073/pnas.0910141107. Epub 2010 Mar 15.

PMID:
20231482
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

A mathematical model for the Kai-protein-based chemical oscillator and clock gene expression rhythms in cyanobacteria.

Miyoshi F, Nakayama Y, Kaizu K, Iwasaki H, Tomita M.

J Biol Rhythms. 2007 Feb;22(1):69-80.

PMID:
17229926
[PubMed - indexed for MEDLINE]
11.

Biochemical analysis of three putative KaiC clock proteins from Synechocystis sp. PCC 6803 suggests their functional divergence.

Wiegard A, Dörrich AK, Deinzer HT, Beck C, Wilde A, Holtzendorff J, Axmann IM.

Microbiology. 2013 May;159(Pt 5):948-58. doi: 10.1099/mic.0.065425-0. Epub 2013 Feb 28.

PMID:
23449916
[PubMed - indexed for MEDLINE]
Free Article
12.

A novel allele of kaiA shortens the circadian period and strengthens interaction of oscillator components in the cyanobacterium Synechococcus elongatus PCC 7942.

Chen Y, Kim YI, Mackey SR, Holtman CK, Liwang A, Golden SS.

J Bacteriol. 2009 Jul;191(13):4392-400. doi: 10.1128/JB.00334-09. Epub 2009 Apr 24.

PMID:
19395479
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria.

Kim YI, Dong G, Carruthers CW Jr, Golden SS, LiWang A.

Proc Natl Acad Sci U S A. 2008 Sep 2;105(35):12825-30. doi: 10.1073/pnas.0800526105. Epub 2008 Aug 26.

PMID:
18728181
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Structural and dynamic aspects of protein clocks: how can they be so slow and stable?

Akiyama S.

Cell Mol Life Sci. 2012 Jul;69(13):2147-60. doi: 10.1007/s00018-012-0919-3. Epub 2012 Jan 25. Review.

PMID:
22273739
[PubMed - indexed for MEDLINE]
15.

Loop-loop interactions regulate KaiA-stimulated KaiC phosphorylation in the cyanobacterial KaiABC circadian clock.

Egli M, Pattanayek R, Sheehan JH, Xu Y, Mori T, Smith JA, Johnson CH.

Biochemistry. 2013 Feb 19;52(7):1208-20. doi: 10.1021/bi301691a. Epub 2013 Feb 7.

PMID:
23351065
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro.

Kageyama H, Nishiwaki T, Nakajima M, Iwasaki H, Oyama T, Kondo T.

Mol Cell. 2006 Jul 21;23(2):161-71.

PMID:
16857583
[PubMed - indexed for MEDLINE]
Free Article
17.

In vitro regulation of circadian phosphorylation rhythm of cyanobacterial clock protein KaiC by KaiA and KaiB.

Nakajima M, Ito H, Kondo T.

FEBS Lett. 2010 Mar 5;584(5):898-902. doi: 10.1016/j.febslet.2010.01.016. Epub 2010 Jan 16.

PMID:
20079736
[PubMed - indexed for MEDLINE]
Free Article
18.

Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods.

Pattanayek R, Williams DR, Pattanayek S, Xu Y, Mori T, Johnson CH, Stewart PL, Egli M.

EMBO J. 2006 May 3;25(9):2017-28. Epub 2006 Apr 20.

PMID:
16628225
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Assembly and disassembly dynamics of the cyanobacterial periodosome.

Akiyama S, Nohara A, Ito K, Maéda Y.

Mol Cell. 2008 Mar 28;29(6):703-16. doi: 10.1016/j.molcel.2008.01.015. Epub 2008 Mar 13.

PMID:
18342562
[PubMed - indexed for MEDLINE]
Free Article
20.

Role of KaiC phosphorylation in the circadian clock system of Synechococcus elongatus PCC 7942.

Nishiwaki T, Satomi Y, Nakajima M, Lee C, Kiyohara R, Kageyama H, Kitayama Y, Temamoto M, Yamaguchi A, Hijikata A, Go M, Iwasaki H, Takao T, Kondo T.

Proc Natl Acad Sci U S A. 2004 Sep 21;101(38):13927-32. Epub 2004 Sep 3.

PMID:
15347812
[PubMed - indexed for MEDLINE]
Free PMC Article
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