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Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression.

Cheng Y, Wu W, Kumar SA, Yu D, Deng W, Tripic T, King DC, Chen KB, Zhang Y, Drautz D, Giardine B, Schuster SC, Miller W, Chiaromonte F, Zhang Y, Blobel GA, Weiss MJ, Hardison RC.

Genome Res. 2009 Dec;19(12):2172-84. doi: 10.1101/gr.098921.109. Epub 2009 Nov 3.


Primary sequence and epigenetic determinants of in vivo occupancy of genomic DNA by GATA1.

Zhang Y, Wu W, Cheng Y, King DC, Harris RS, Taylor J, Chiaromonte F, Hardison RC.

Nucleic Acids Res. 2009 Nov;37(21):7024-38. doi: 10.1093/nar/gkp747. Epub .


Dynamic shifts in occupancy by TAL1 are guided by GATA factors and drive large-scale reprogramming of gene expression during hematopoiesis.

Wu W, Morrissey CS, Keller CA, Mishra T, Pimkin M, Blobel GA, Weiss MJ, Hardison RC.

Genome Res. 2014 Dec;24(12):1945-62. doi: 10.1101/gr.164830.113. Epub 2014 Oct 15.


Chromatin occupancy analysis reveals genome-wide GATA factor switching during hematopoiesis.

Doré LC, Chlon TM, Brown CD, White KP, Crispino JD.

Blood. 2012 Apr 19;119(16):3724-33. doi: 10.1182/blood-2011-09-380634. Epub 2012 Mar 1.


Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration.

Wu W, Cheng Y, Keller CA, Ernst J, Kumar SA, Mishra T, Morrissey C, Dorman CM, Chen KB, Drautz D, Giardine B, Shibata Y, Song L, Pimkin M, Crawford GE, Furey TS, Kellis M, Miller W, Taylor J, Schuster SC, Zhang Y, Chiaromonte F, Blobel GA, Weiss MJ, Hardison RC.

Genome Res. 2011 Oct;21(10):1659-71. doi: 10.1101/gr.125088.111. Epub 2011 Jul 27.


Insights into GATA-1-mediated gene activation versus repression via genome-wide chromatin occupancy analysis.

Yu M, Riva L, Xie H, Schindler Y, Moran TB, Cheng Y, Yu D, Hardison R, Weiss MJ, Orkin SH, Bernstein BE, Fraenkel E, Cantor AB.

Mol Cell. 2009 Nov 25;36(4):682-95. doi: 10.1016/j.molcel.2009.11.002.


Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif.

Cheng Y, King DC, Dore LC, Zhang X, Zhou Y, Zhang Y, Dorman C, Abebe D, Kumar SA, Chiaromonte F, Miller W, Green RD, Weiss MJ, Hardison RC.

Genome Res. 2008 Dec;18(12):1896-905. doi: 10.1101/gr.083089.108. Epub 2008 Sep 25.


GATA factor switching from GATA2 to GATA1 contributes to erythroid differentiation.

Suzuki M, Kobayashi-Osaki M, Tsutsumi S, Pan X, Ohmori S, Takai J, Moriguchi T, Ohneda O, Ohneda K, Shimizu R, Kanki Y, Kodama T, Aburatani H, Yamamoto M.

Genes Cells. 2013 Nov;18(11):921-33. doi: 10.1111/gtc.12086. Epub 2013 Aug 1.


Global transcriptome and chromatin occupancy analysis reveal the short isoform of GATA1 is deficient for erythroid specification and gene expression.

Chlon TM, McNulty M, Goldenson B, Rosinski A, Crispino JD.

Haematologica. 2015 May;100(5):575-84. doi: 10.3324/haematol.2014.112714. Epub 2015 Feb 14.


Regulation of GATA factor expression is distinct between erythroid and mast cell lineages.

Ohmori S, Takai J, Ishijima Y, Suzuki M, Moriguchi T, Philipsen S, Yamamoto M, Ohneda K.

Mol Cell Biol. 2012 Dec;32(23):4742-55. doi: 10.1128/MCB.00718-12. Epub 2012 Sep 17.


Epigenetic Determinants of Erythropoiesis: Role of the Histone Methyltransferase SetD8 in Promoting Erythroid Cell Maturation and Survival.

DeVilbiss AW, Sanalkumar R, Hall BD, Katsumura KR, de Andrade IF, Bresnick EH.

Mol Cell Biol. 2015 Jun;35(12):2073-87. doi: 10.1128/MCB.01422-14. Epub 2015 Apr 8.


Novel roles for KLF1 in erythropoiesis revealed by mRNA-seq.

Tallack MR, Magor GW, Dartigues B, Sun L, Huang S, Fittock JM, Fry SV, Glazov EA, Bailey TL, Perkins AC.

Genome Res. 2012 Dec;22(12):2385-98. doi: 10.1101/gr.135707.111. Epub 2012 Jul 26.


Gene induction and repression during terminal erythropoiesis are mediated by distinct epigenetic changes.

Wong P, Hattangadi SM, Cheng AW, Frampton GM, Young RA, Lodish HF.

Blood. 2011 Oct 20;118(16):e128-38. doi: 10.1182/blood-2011-03-341404. Epub 2011 Aug 22.


Progenitor stage-specific activity of a cis-acting double GATA motif for Gata1 gene expression.

Moriguchi T, Suzuki M, Yu L, Takai J, Ohneda K, Yamamoto M.

Mol Cell Biol. 2015 Mar;35(5):805-15. doi: 10.1128/MCB.01011-14. Epub 2014 Dec 22.


Hypoxia-inducible factor 1-mediated human GATA1 induction promotes erythroid differentiation under hypoxic conditions.

Zhang FL, Shen GM, Liu XL, Wang F, Zhao YZ, Zhang JW.

J Cell Mol Med. 2012 Aug;16(8):1889-99. doi: 10.1111/j.1582-4934.2011.01484.x.


Genome-wide identification of TAL1's functional targets: insights into its mechanisms of action in primary erythroid cells.

Kassouf MT, Hughes JR, Taylor S, McGowan SJ, Soneji S, Green AL, Vyas P, Porcher C.

Genome Res. 2010 Aug;20(8):1064-83. doi: 10.1101/gr.104935.110. Epub 2010 Jun 21.


Gfi-1B promoter remains associated with active chromatin marks throughout erythroid differentiation of human primary progenitor cells.

Laurent B, Randrianarison-Huetz V, Kadri Z, Roméo PH, Porteu F, Duménil D.

Stem Cells. 2009 Sep;27(9):2153-62. doi: 10.1002/stem.151.


GATA-1 genome-wide occupancy associates with distinct epigenetic profiles in mouse fetal liver erythropoiesis.

Papadopoulos GL, Karkoulia E, Tsamardinos I, Porcher C, Ragoussis J, Bungert J, Strouboulis J.

Nucleic Acids Res. 2013 May;41(9):4938-48. doi: 10.1093/nar/gkt167. Epub 2013 Mar 21.


Divergent functions of hematopoietic transcription factors in lineage priming and differentiation during erythro-megakaryopoiesis.

Pimkin M, Kossenkov AV, Mishra T, Morrissey CS, Wu W, Keller CA, Blobel GA, Lee D, Beer MA, Hardison RC, Weiss MJ.

Genome Res. 2014 Dec;24(12):1932-44. doi: 10.1101/gr.164178.113. Epub 2014 Oct 15.


A regulatory network governing Gata1 and Gata2 gene transcription orchestrates erythroid lineage differentiation.

Moriguchi T, Yamamoto M.

Int J Hematol. 2014 Nov;100(5):417-24. doi: 10.1007/s12185-014-1568-0. Epub 2014 Mar 18. Review.

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