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Items: 1 to 20 of 139

1.

Survey of large protein complexes in D. vulgaris reveals great structural diversity.

Han BG, Dong M, Liu H, Camp L, Geller J, Singer M, Hazen TC, Choi M, Witkowska HE, Ball DA, Typke D, Downing KH, Shatsky M, Brenner SE, Chandonia JM, Biggin MD, Glaeser RM.

Proc Natl Acad Sci U S A. 2009 Sep 29;106(39):16580-5. doi: 10.1073/pnas.0813068106. Epub 2009 Sep 11.

2.

Hybrid cluster proteins (HCPs) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at 1.25 A resolution using synchrotron radiation.

Macedo S, Mitchell EP, Romão CV, Cooper SJ, Coelho R, Liu MY, Xavier AV, LeGall J, Bailey S, Garner DC, Hagen WR, Teixeira M, Carrondo MA, Lindley P.

J Biol Inorg Chem. 2002 Apr;7(4-5):514-25. Epub 2002 Jan 23.

PMID:
11941509
3.

Structural and functional relationships in the hybrid cluster protein family: structure of the anaerobically purified hybrid cluster protein from Desulfovibrio vulgaris at 1.35 A resolution.

Aragão D, Mitchell EP, Frazão CF, Carrondo MA, Lindley PF.

Acta Crystallogr D Biol Crystallogr. 2008 Jun;64(Pt 6):665-74. doi: 10.1107/S0907444908009165. Epub 2008 May 14.

PMID:
18560155
4.

Octomeric pyruvate-ferredoxin oxidoreductase from Desulfovibrio vulgaris.

Garczarek F, Dong M, Typke D, Witkowska HE, Hazen TC, Nogales E, Biggin MD, Glaeser RM.

J Struct Biol. 2007 Jul;159(1):9-18. Epub 2007 Feb 17.

PMID:
17400475
5.

Reduced hybrid cluster proteins (HCP) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at high resolution using synchrotron radiation.

Aragão D, Macedo S, Mitchell EP, Romão CV, Liu MY, Frazão C, Saraiva LM, Xavier AV, LeGall J, van Dongen WM, Hagen WR, Teixeira M, Carrondo MA, Lindley P.

J Biol Inorg Chem. 2003 May;8(5):540-8. Epub 2003 Feb 15.

PMID:
12764602
6.

Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis.

Kitamura M, Terakawa K, Inoue H, Hayashida T, Suto K, Morimoto Y, Yasuoka N, Shibata N, Higuchi Y.

J Biochem. 2007 Apr;141(4):459-68. Epub 2007 Jan 29.

PMID:
17261542
7.

The Tmc complex from Desulfovibrio vulgaris hildenborough is involved in transmembrane electron transfer from periplasmic hydrogen oxidation.

Pereira PM, Teixeira M, Xavier AV, Louro RO, Pereira IA.

Biochemistry. 2006 Aug 29;45(34):10359-67.

PMID:
16922512
8.

Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein.

Matsumoto N, Yamada M, Kurakata Y, Yoshida H, Kamitori S, Nishikawa A, Tonozuka T.

FEBS J. 2009 Jun;276(11):3008-19. doi: 10.1111/j.1742-4658.2009.07020.x. Epub 2009 Apr 20.

9.

Integrative analysis of transcriptomic and proteomic data of Desulfovibrio vulgaris: a non-linear model to predict abundance of undetected proteins.

Torres-García W, Zhang W, Runger GC, Johnson RH, Meldrum DR.

Bioinformatics. 2009 Aug 1;25(15):1905-14. doi: 10.1093/bioinformatics/btp325. Epub 2009 May 15.

10.

Desulfovibrio desulfuricans G20 tetraheme cytochrome structure at 1.5 Angstrom and cytochrome interaction with metal complexes.

Pattarkine MV, Tanner JJ, Bottoms CA, Lee YH, Wall JD.

J Mol Biol. 2006 May 19;358(5):1314-27. Epub 2006 Mar 23.

PMID:
16580681
11.

Large macromolecular complexes in the Protein Data Bank: a status report.

Dutta S, Berman HM.

Structure. 2005 Mar;13(3):381-8. Review.

12.

Desulfovibrio vulgaris Hildenborough HydE and HydG interact with the HydA subunit of the [FeFe] hydrogenase.

Mansure JJ, Hallenbeck PC.

Biotechnol Lett. 2008 Oct;30(10):1765-9. doi: 10.1007/s10529-008-9755-9. Epub 2008 Jun 18.

PMID:
18563582
13.

Structure analysis of the flavoredoxin from Desulfovibrio vulgaris Miyazaki F reveals key residues that discriminate the functions and properties of the flavin reductase family.

Shibata N, Ueda Y, Takeuchi D, Haruyama Y, Kojima S, Sato J, Niimura Y, Kitamura M, Higuchi Y.

FEBS J. 2009 Sep;276(17):4840-53.

PMID:
19708087
14.

Sequential and structural analysis of [NiFe]-hydrogenase-maturation proteins from Desulfovibrio vulgaris Miyazaki F.

Agrawal AG, Voordouw G, Gärtner W.

Antonie Van Leeuwenhoek. 2006 Oct;90(3):281-90. Epub 2006 Aug 11.

PMID:
16902753
15.

High-resolution crystal structures of Desulfovibrio vulgaris (Hildenborough) nigerythrin: facile, redox-dependent iron movement, domain interface variability, and peroxidase activity in the rubrerythrins.

Iyer RB, Silaghi-Dumitrescu R, Kurtz DM Jr, Lanzilotta WN.

J Biol Inorg Chem. 2005 Jun;10(4):407-16. Epub 2005 May 14. Erratum in: J Biol Inorg Chem. 2005 Aug;10(5):592.

PMID:
15895271
16.

Crystal structure and spectroscopic studies of a stable mixed-valent state of the hemerythrin-like domain of a bacterial chemotaxis protein.

Onoda A, Okamoto Y, Sugimoto H, Shiro Y, Hayashi T.

Inorg Chem. 2011 Jun 6;50(11):4892-9. doi: 10.1021/ic2001267. Epub 2011 Apr 29.

PMID:
21528842
17.

X-ray induced reduction of the crystal of high-molecular-weight cytochrome c revealed by microspectrophotometry.

Sato M, Shibata N, Morimoto Y, Takayama Y, Ozawa K, Akutsu H, Higuchi Y, Yasuoka N.

J Synchrotron Radiat. 2004 Jan 1;11(Pt 1):113-6. Epub 2003 Nov 28.

PMID:
14646149
18.

Ab initio structure determination of a small protein, rubredoxin, by direct methods.

Mukherjee M.

Acta Crystallogr D Biol Crystallogr. 1999 Apr;55(Pt 4):820-5.

PMID:
10089313
19.

Taking advantage of local structure descriptors to analyze interresidue contacts in protein structures and protein complexes.

Martin J, Regad L, Etchebest C, Camproux AC.

Proteins. 2008 Nov 15;73(3):672-89. doi: 10.1002/prot.22091.

PMID:
18491388
20.

Structural and functional similarities between two bacterial chromosome compacting machineries.

Lim JH, Oh BH.

Biochem Biophys Res Commun. 2009 Aug 28;386(3):415-9. doi: 10.1016/j.bbrc.2009.06.019. Epub 2009 Jun 10. Review.

PMID:
19523447
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