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Items: 1 to 20 of 88

1.

SherLoc2: a high-accuracy hybrid method for predicting subcellular localization of proteins.

Briesemeister S, Blum T, Brady S, Lam Y, Kohlbacher O, Shatkay H.

J Proteome Res. 2009 Nov;8(11):5363-6. doi: 10.1021/pr900665y.

PMID:
19764776
2.

MultiLoc2: integrating phylogeny and Gene Ontology terms improves subcellular protein localization prediction.

Blum T, Briesemeister S, Kohlbacher O.

BMC Bioinformatics. 2009 Sep 1;10:274. doi: 10.1186/1471-2105-10-274.

3.

SherLoc: high-accuracy prediction of protein subcellular localization by integrating text and protein sequence data.

Shatkay H, Höglund A, Brady S, Blum T, Dönnes P, Kohlbacher O.

Bioinformatics. 2007 Jun 1;23(11):1410-7. Epub 2007 Mar 28.

4.

MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs and amino acid composition.

Höglund A, Dönnes P, Blum T, Adolph HW, Kohlbacher O.

Bioinformatics. 2006 May 15;22(10):1158-65. Epub 2006 Jan 20.

6.

LOCSVMPSI: a web server for subcellular localization of eukaryotic proteins using SVM and profile of PSI-BLAST.

Xie D, Li A, Wang M, Fan Z, Feng H.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W105-10.

7.

Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms.

Chou KC, Shen HB.

Nat Protoc. 2008;3(2):153-62. doi: 10.1038/nprot.2007.494.

PMID:
18274516
8.

Hum-PLoc: a novel ensemble classifier for predicting human protein subcellular localization.

Chou KC, Shen HB.

Biochem Biophys Res Commun. 2006 Aug 18;347(1):150-7. Epub 2006 Jun 21. Erratum in: Biochem Biophys Res Commun. 2006 Oct 6;348(4):1479.

PMID:
16808903
9.

Euk-PLoc: an ensemble classifier for large-scale eukaryotic protein subcellular location prediction.

Shen HB, Yang J, Chou KC.

Amino Acids. 2007 Jul;33(1):57-67. Epub 2007 Jan 19.

PMID:
17235453
10.

ESLpred2: improved method for predicting subcellular localization of eukaryotic proteins.

Garg A, Raghava GP.

BMC Bioinformatics. 2008 Nov 28;9:503. doi: 10.1186/1471-2105-9-503.

11.

Prediction of protein subcellular localization.

Yu CS, Chen YC, Lu CH, Hwang JK.

Proteins. 2006 Aug 15;64(3):643-51.

PMID:
16752418
12.

Gene ontology based transfer learning for protein subcellular localization.

Mei S, Fei W, Zhou S.

BMC Bioinformatics. 2011 Feb 2;12:44. doi: 10.1186/1471-2105-12-44.

13.

Predicting subcellular localization of proteins in a hybridization space.

Cai YD, Chou KC.

Bioinformatics. 2004 May 1;20(7):1151-6. Epub 2004 Feb 5.

14.
15.

PSCL: predicting protein subcellular localization based on optimal functional domains.

Wang K, Hu LL, Shi XH, Dong YS, Li HP, Wen TQ.

Protein Pept Lett. 2012 Jan;19(1):15-22.

PMID:
21919864
16.

YLoc--an interpretable web server for predicting subcellular localization.

Briesemeister S, Rahnenführer J, Kohlbacher O.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W497-502. doi: 10.1093/nar/gkq477. Epub 2010 May 27.

17.

Predicting subcellular localization with AdaBoost Learner.

Jin YH, Niu B, Feng KY, Lu WC, Cai YD, Li GZ.

Protein Pept Lett. 2008;15(3):286-9.

PMID:
18336359
18.

pTARGET [corrected] a new method for predicting protein subcellular localization in eukaryotes.

Guda C, Subramaniam S.

Bioinformatics. 2005 Nov 1;21(21):3963-9. Epub 2005 Sep 6. Erratum in: Bioinformatics. 2005 Dec 15;21(24):4434.

19.
20.

Predicting protein subcellular locations with feature selection and analysis.

Cai Y, He J, Li X, Feng K, Lu L, Feng K, Kong X, Lu W.

Protein Pept Lett. 2010 Apr;17(4):464-72.

PMID:
19995336
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