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Results: 1 to 20 of 108

1.

Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network.

Linghu B, Snitkin ES, Hu Z, Xia Y, Delisi C.

Genome Biol. 2009;10(9):R91. doi: 10.1186/gb-2009-10-9-r91. Epub 2009 Sep 3.

PMID:
19728866
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Genomic convergence and network analysis approach to identify candidate genes in Alzheimer's disease.

Talwar P, Silla Y, Grover S, Gupta M, Agarwal R, Kushwaha S, Kukreti R.

BMC Genomics. 2014 Mar 15;15:199. doi: 10.1186/1471-2164-15-199.

PMID:
24628925
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Exploiting protein-protein interaction networks for genome-wide disease-gene prioritization.

Guney E, Oliva B.

PLoS One. 2012;7(9):e43557. doi: 10.1371/journal.pone.0043557. Epub 2012 Sep 21.

PMID:
23028459
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Discovering cancer genes by integrating network and functional properties.

Li L, Zhang K, Lee J, Cordes S, Davis DP, Tang Z.

BMC Med Genomics. 2009 Sep 19;2:61. doi: 10.1186/1755-8794-2-61.

PMID:
19765316
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

A random set scoring model for prioritization of disease candidate genes using protein complexes and data-mining of GeneRIF, OMIM and PubMed records.

Jiang L, Edwards SM, Thomsen B, Workman CT, Guldbrandtsen B, Sørensen P.

BMC Bioinformatics. 2014 Sep 24;15:315. doi: 10.1186/1471-2105-15-315.

PMID:
25253562
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Network-based global inference of human disease genes.

Wu X, Jiang R, Zhang MQ, Li S.

Mol Syst Biol. 2008;4:189. doi: 10.1038/msb.2008.27. Epub 2008 May 6.

PMID:
18463613
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Functional genomics complements quantitative genetics in identifying disease-gene associations.

Guan Y, Ackert-Bicknell CL, Kell B, Troyanskaya OG, Hibbs MA.

PLoS Comput Biol. 2010 Nov 11;6(11):e1000991. doi: 10.1371/journal.pcbi.1000991.

PMID:
21085640
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Predicting disease-related subnetworks for type 1 diabetes using a new network activity score.

Gao S, Jia S, Hessner MJ, Wang X.

OMICS. 2012 Oct;16(10):566-78. doi: 10.1089/omi.2012.0029. Epub 2012 Aug 23.

PMID:
22917479
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Identification of susceptibility modules for coronary artery disease using a genome wide integrated network analysis.

Duan S, Luo X, Dong C.

Gene. 2013 Dec 1;531(2):347-54. doi: 10.1016/j.gene.2013.08.059. Epub 2013 Aug 29.

PMID:
23994195
[PubMed - indexed for MEDLINE]
10.

Recent approaches to the prioritization of candidate disease genes.

Doncheva NT, Kacprowski T, Albrecht M.

Wiley Interdiscip Rev Syst Biol Med. 2012 Sep-Oct;4(5):429-42. doi: 10.1002/wsbm.1177. Epub 2012 Jun 11. Review.

PMID:
22689539
[PubMed - indexed for MEDLINE]
11.

Inferring gene-phenotype associations via global protein complex network propagation.

Yang P, Li X, Wu M, Kwoh CK, Ng SK.

PLoS One. 2011;6(7):e21502. doi: 10.1371/journal.pone.0021502. Epub 2011 Jul 25.

PMID:
21799737
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Prioritizing candidate disease genes by network-based boosting of genome-wide association data.

Lee I, Blom UM, Wang PI, Shim JE, Marcotte EM.

Genome Res. 2011 Jul;21(7):1109-21. doi: 10.1101/gr.118992.110. Epub 2011 May 2.

PMID:
21536720
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Constructing a gene semantic similarity network for the inference of disease genes.

Jiang R, Gan M, He P.

BMC Syst Biol. 2011 Dec 14;5 Suppl 2:S2. doi: 10.1186/1752-0509-5-S2-S2. Epub 2011 Dec 14.

PMID:
22784573
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Laboratory mouse models for the human genome-wide associations.

Kitsios GD, Tangri N, Castaldi PJ, Ioannidis JP.

PLoS One. 2010 Nov 1;5(11):e13782. doi: 10.1371/journal.pone.0013782.

PMID:
21072174
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

An integrated genomic analysis of gene-function correlation on schizophrenia susceptibility genes.

Chu TT, Liu Y.

J Hum Genet. 2010 May;55(5):285-92. doi: 10.1038/jhg.2010.24. Epub 2010 Mar 26.

PMID:
20339380
[PubMed - indexed for MEDLINE]
16.

[Genome-wide association study on complex diseases: genetic statistical issues].

Yan WL.

Yi Chuan. 2008 May;30(5):543-9. Review. Chinese.

PMID:
18487142
[PubMed - indexed for MEDLINE]
17.

Identifying disease-causal genes using Semantic Web-based representation of integrated genomic and phenomic knowledge.

Gudivada RC, Qu XA, Chen J, Jegga AG, Neumann EK, Aronow BJ.

J Biomed Inform. 2008 Oct;41(5):717-29. doi: 10.1016/j.jbi.2008.07.004. Epub 2008 Aug 23.

PMID:
18755295
[PubMed - indexed for MEDLINE]
Free Article
18.

Comparison of automated candidate gene prediction systems using genes implicated in type 2 diabetes by genome-wide association studies.

Teber ET, Liu JY, Ballouz S, Fatkin D, Wouters MA.

BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S69. doi: 10.1186/1471-2105-10-S1-S69.

PMID:
19208173
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Inferring disease and gene set associations with rank coherence in networks.

Hwang T, Zhang W, Xie M, Liu J, Kuang R.

Bioinformatics. 2011 Oct 1;27(19):2692-9. doi: 10.1093/bioinformatics/btr463. Epub 2011 Aug 8.

PMID:
21824970
[PubMed - indexed for MEDLINE]
Free Article
20.

Vavien: an algorithm for prioritizing candidate disease genes based on topological similarity of proteins in interaction networks.

Erten S, Bebek G, Koyutürk M.

J Comput Biol. 2011 Nov;18(11):1561-74. doi: 10.1089/cmb.2011.0154. Epub 2011 Oct 28.

PMID:
22035267
[PubMed - indexed for MEDLINE]
Free PMC Article

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