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Items: 1 to 20 of 233


Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1.

Berg Miller ME, Antonopoulos DA, Rincon MT, Band M, Bari A, Akraiko T, Hernandez A, Thimmapuram J, Henrissat B, Coutinho PM, Borovok I, Jindou S, Lamed R, Flint HJ, Bayer EA, White BA.

PLoS One. 2009 Aug 14;4(8):e6650. doi: 10.1371/journal.pone.0006650.


Abundance and diversity of dockerin-containing proteins in the fiber-degrading rumen bacterium, Ruminococcus flavefaciens FD-1.

Rincon MT, Dassa B, Flint HJ, Travis AJ, Jindou S, Borovok I, Lamed R, Bayer EA, Henrissat B, Coutinho PM, Antonopoulos DA, Berg Miller ME, White BA.

PLoS One. 2010 Aug 30;5(8):e12476. doi: 10.1371/journal.pone.0012476.


Atypical cohesin-dockerin complex responsible for cell surface attachment of cellulosomal components: binding fidelity, promiscuity, and structural buttresses.

Salama-Alber O, Jobby MK, Chitayat S, Smith SP, White BA, Shimon LJ, Lamed R, Frolow F, Bayer EA.

J Biol Chem. 2013 Jun 7;288(23):16827-38. doi: 10.1074/jbc.M113.466672. Epub 2013 Apr 11.


Crystal structure of an uncommon cellulosome-related protein module from Ruminococcus flavefaciens that resembles papain-like cysteine peptidases.

Levy-Assaraf M, Voronov-Goldman M, Rozman Grinberg I, Weiserman G, Shimon LJ, Jindou S, Borovok I, White BA, Bayer EA, Lamed R, Frolow F.

PLoS One. 2013;8(2):e56138. doi: 10.1371/journal.pone.0056138. Epub 2013 Feb 14.


Biochemical analyses of multiple endoxylanases from the rumen bacterium Ruminococcus albus 8 and their synergistic activities with accessory hemicellulose-degrading enzymes.

Moon YH, Iakiviak M, Bauer S, Mackie RI, Cann IK.

Appl Environ Microbiol. 2011 Aug;77(15):5157-69. doi: 10.1128/AEM.00353-11. Epub 2011 Jun 10.


Novel organization and divergent dockerin specificities in the cellulosome system of Ruminococcus flavefaciens.

Rincon MT, Ding SY, McCrae SI, Martin JC, Aurilia V, Lamed R, Shoham Y, Bayer EA, Flint HJ.

J Bacteriol. 2003 Feb;185(3):703-13.


Expression of cellulosome components and type IV pili within the extracellular proteome of Ruminococcus flavefaciens 007.

Vodovnik M, Duncan SH, Reid MD, Cantlay L, Turner K, Parkhill J, Lamed R, Yeoman CJ, Miller ME, White BA, Bayer EA, Marinšek-Logar R, Flint HJ.

PLoS One. 2013 Jun 4;8(6):e65333. doi: 10.1371/journal.pone.0065333. Print 2013.


Rumen cellulosomics: divergent fiber-degrading strategies revealed by comparative genome-wide analysis of six ruminococcal strains.

Dassa B, Borovok I, Ruimy-Israeli V, Lamed R, Flint HJ, Duncan SH, Henrissat B, Coutinho P, Morrison M, Mosoni P, Yeoman CJ, White BA, Bayer EA.

PLoS One. 2014 Jul 3;9(7):e99221. doi: 10.1371/journal.pone.0099221. eCollection 2014.


Cellulosomal scaffoldin-like proteins from Ruminococcus flavefaciens.

Ding SY, Rincon MT, Lamed R, Martin JC, McCrae SI, Aurilia V, Shoham Y, Bayer EA, Flint HJ.

J Bacteriol. 2001 Mar;183(6):1945-53.


Genome-wide analysis of acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system.

Dassa B, Borovok I, Lamed R, Henrissat B, Coutinho P, Hemme CL, Huang Y, Zhou J, Bayer EA.

BMC Genomics. 2012 May 30;13:210. doi: 10.1186/1471-2164-13-210.


Overexpression, crystallization and preliminary X-ray characterization of Ruminococcus flavefaciens scaffoldin C cohesin in complex with a dockerin from an uncharacterized CBM-containing protein.

Bule P, Ruimy-Israeli V, Cardoso V, Bayer EA, Fontes CM, Najmudin S.

Acta Crystallogr F Struct Biol Commun. 2014 Aug;70(Pt 8):1061-4. doi: 10.1107/S2053230X14012667. Epub 2014 Jul 23.


Expression, purification and crystallization of a novel carbohydrate-binding module from the Ruminococcus flavefaciens cellulosome.

Venditto I, Centeno MS, Ferreira LM, Fontes CM, Najmudin S.

Acta Crystallogr F Struct Biol Commun. 2014 Dec 1;70(Pt 12):1653-6. doi: 10.1107/S2053230X14024248. Epub 2014 Nov 14.


Plant cell wall breakdown by anaerobic microorganisms from the Mammalian digestive tract.

Flint HJ, Bayer EA.

Ann N Y Acad Sci. 2008 Mar;1125:280-8. doi: 10.1196/annals.1419.022.


Crystallization and preliminary crystallographic studies of a novel noncatalytic carbohydrate-binding module from the Ruminococcus flavefaciens cellulosome.

Venditto I, Goyal A, Thompson A, Ferreira LM, Fontes CM, Najmudin S.

Acta Crystallogr F Struct Biol Commun. 2015 Jan 1;71(Pt 1):45-8. doi: 10.1107/S2053230X14025576. Epub 2015 Jan 1.


Unconventional mode of attachment of the Ruminococcus flavefaciens cellulosome to the cell surface.

Rincon MT, Cepeljnik T, Martin JC, Lamed R, Barak Y, Bayer EA, Flint HJ.

J Bacteriol. 2005 Nov;187(22):7569-78.


The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist.

Suen G, Weimer PJ, Stevenson DM, Aylward FO, Boyum J, Deneke J, Drinkwater C, Ivanova NN, Mikhailova N, Chertkov O, Goodwin LA, Currie CR, Mead D, Brumm PJ.

PLoS One. 2011 Apr 19;6(4):e18814. doi: 10.1371/journal.pone.0018814.


Cellulosome gene cluster analysis for gauging the diversity of the ruminal cellulolytic bacterium Ruminococcus flavefaciens.

Jindou S, Brulc JM, Levy-Assaraf M, Rincon MT, Flint HJ, Berg ME, Wilson MK, White BA, Bayer EA, Lamed R, Borovok I.

FEMS Microbiol Lett. 2008 Aug;285(2):188-94. doi: 10.1111/j.1574-6968.2008.01234.x. Epub 2008 Jun 28.


Insights into a type III cohesin-dockerin recognition interface from the cellulose-degrading bacterium Ruminococcus flavefaciens.

Weinstein JY, Slutzki M, Karpol A, Barak Y, Gul O, Lamed R, Bayer EA, Fried DB.

J Mol Recognit. 2015 Mar;28(3):148-54. doi: 10.1002/jmr.2380. Epub 2015 Jan 30.


Expression, purification, crystallization and preliminary X-ray analysis of CttA, a putative cellulose-binding protein from Ruminococcus flavefaciens.

Venditto I, Bule P, Thompson A, Sanchez-Weatherby J, Sandy J, Ferreira LM, Fontes CM, Najmudin S.

Acta Crystallogr F Struct Biol Commun. 2015 Jun;71(Pt 6):784-9. doi: 10.1107/S2053230X15008249. Epub 2015 May 22.

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