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Comparative genomics in chicken and Pekin duck using FISH mapping and microarray analysis.

Skinner BM, Robertson LB, Tempest HG, Langley EJ, Ioannou D, Fowler KE, Crooijmans RP, Hall AD, Griffin DK, Völker M.

BMC Genomics. 2009 Aug 5;10:357. doi: 10.1186/1471-2164-10-357.


Whole genome comparative studies between chicken and turkey and their implications for avian genome evolution.

Griffin DK, Robertson LB, Tempest HG, Vignal A, Fillon V, Crooijmans RP, Groenen MA, Deryusheva S, Gaginskaya E, Carré W, Waddington D, Talbot R, Völker M, Masabanda JS, Burt DW.

BMC Genomics. 2008 Apr 14;9:168. doi: 10.1186/1471-2164-9-168.


FISH mapping of 57 BAC clones reveals strong conservation of synteny between Galliformes and Anseriformes.

Fillon V, Vignoles M, Crooijmans RP, Groenen MA, Zoorob R, Vignal A.

Anim Genet. 2007 Jun;38(3):303-7.


A comparative physical map reveals the pattern of chromosomal evolution between the turkey (Meleagris gallopavo) and chicken (Gallus gallus) genomes.

Zhang Y, Zhang X, O'Hare TH, Payne WS, Dong JJ, Scheuring CF, Zhang M, Huang JJ, Lee MK, Delany ME, Zhang HB, Dodgson JB.

BMC Genomics. 2011 Sep 9;12:447. doi: 10.1186/1471-2164-12-447.


Integrated maps in quail (Coturnix japonica) confirm the high degree of synteny conservation with chicken (Gallus gallus) despite 35 million years of divergence.

Kayang BB, Fillon V, Inoue-Murayama M, Miwa M, Leroux S, Fève K, Monvoisin JL, Pitel F, Vignoles M, Mouilhayrat C, Beaumont C, Ito S, Minvielle F, Vignal A.

BMC Genomics. 2006 May 2;7:101.


Copy number variation, chromosome rearrangement, and their association with recombination during avian evolution.

Völker M, Backström N, Skinner BM, Langley EJ, Bunzey SK, Ellegren H, Griffin DK.

Genome Res. 2010 Apr;20(4):503-11. doi: 10.1101/gr.103663.109. Epub 2010 Mar 31.


A SNP based linkage map of the turkey genome reveals multiple intrachromosomal rearrangements between the turkey and chicken genomes.

Aslam ML, Bastiaansen JW, Crooijmans RP, Vereijken A, Megens HJ, Groenen MA.

BMC Genomics. 2010 Nov 20;11:647. doi: 10.1186/1471-2164-11-647.


Application of chicken microarrays for gene expression analysis in other avian species.

Crowley TM, Haring VR, Burggraaf S, Moore RJ.

BMC Genomics. 2009 Jul 14;10 Suppl 2:S3. doi: 10.1186/1471-2164-10-S2-S3.


A genetic and cytogenetic map for the duck (Anas platyrhynchos).

Huang Y, Zhao Y, Haley CS, Hu S, Hao J, Wu C, Li N.

Genetics. 2006 May;173(1):287-96. Epub 2006 Mar 1.


Avian comparative genomics: reciprocal chromosome painting between domestic chicken (Gallus gallus) and the stone curlew (Burhinus oedicnemus, Charadriiformes)--an atypical species with low diploid number.

Nie W, O'Brien PC, Ng BL, Fu B, Volobouev V, Carter NP, Ferguson-Smith MA, Yang F.

Chromosome Res. 2009;17(1):99-113. doi: 10.1007/s10577-009-9021-6. Epub 2009 Jan 27.


Chromosome rearrangements between chicken and guinea fowl defined by comparative chromosome painting and FISH mapping of DNA clones.

Shibusawa M, Nishida-Umehara C, Masabanda J, Griffin DK, Isobe T, Matsuda Y.

Cytogenet Genome Res. 2002;98(2-3):225-30.


Intrachromosomal rearrangements in avian genome evolution: evidence for regions prone to breakpoints.

Skinner BM, Griffin DK.

Heredity (Edinb). 2012 Jan;108(1):37-41. doi: 10.1038/hdy.2011.99. Epub 2011 Nov 2.


Global patterns of apparent copy number variation in birds revealed by cross-species comparative genomic hybridization.

Skinner BM, Al Mutery A, Smith D, Völker M, Hojjat N, Raja S, Trim S, Houde P, Boecklen WJ, Griffin DK.

Chromosome Res. 2014 Apr;22(1):59-70. doi: 10.1007/s10577-014-9405-0.


Integrating cytogenetics and genomics in comparative evolutionary studies of cichlid fish.

Mazzuchelli J, Kocher TD, Yang F, Martins C.

BMC Genomics. 2012 Sep 9;13:463. doi: 10.1186/1471-2164-13-463.


Development of genomic resources for the prairie vole (Microtus ochrogaster): construction of a BAC library and vole-mouse comparative cytogenetic map.

McGraw LA, Davis JK, Lowman JJ, ten Hallers BF, Koriabine M, Young LJ, de Jong PJ, Rudd MK, Thomas JW.

BMC Genomics. 2010 Jan 28;11:70. doi: 10.1186/1471-2164-11-70.


Genome evolution in Reptilia: in silico chicken mapping of 12,000 BAC-end sequences from two reptiles and a basal bird.

Chapus C, Edwards SV.

BMC Genomics. 2009 Jul 14;10 Suppl 2:S8. doi: 10.1186/1471-2164-10-S2-S8.


Copy number variation in Fayoumi and Leghorn chickens analyzed using array comparative genomic hybridization.

Abernathy J, Li X, Jia X, Chou W, Lamont SJ, Crooijmans R, Zhou H.

Anim Genet. 2014 Jun;45(3):400-11. doi: 10.1111/age.12141. Epub 2014 Mar 15.


Comparative FISH mapping suggests poor conservation between chicken and duck genes.

Yuan J, Tang B, Zhang L, Li N.

Anim Genet. 2005 Oct;36(5):435-7. No abstract available.


A comparative cytogenetic study of chromosome homology between chicken and Japanese quail.

Shibusawa M, Minai S, Nishida-Umehara C, Suzuki T, Mano T, Yamada K, Namikawa T, Matsuda Y.

Cytogenet Cell Genet. 2001;95(1-2):103-9.

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