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Items: 1 to 20 of 107

1.

Evolutionary breakpoints in the gibbon suggest association between cytosine methylation and karyotype evolution.

Carbone L, Harris RA, Vessere GM, Mootnick AR, Humphray S, Rogers J, Kim SK, Wall JD, Martin D, Jurka J, Milosavljevic A, de Jong PJ.

PLoS Genet. 2009 Jun;5(6):e1000538. doi: 10.1371/journal.pgen.1000538. Epub 2009 Jun 26.

2.

A high-resolution map of synteny disruptions in gibbon and human genomes.

Carbone L, Vessere GM, ten Hallers BF, Zhu B, Osoegawa K, Mootnick A, Kofler A, Wienberg J, Rogers J, Humphray S, Scott C, Harris RA, Milosavljevic A, de Jong PJ.

PLoS Genet. 2006 Dec 29;2(12):e223. Epub 2006 Nov 13.

3.

Tracking the complex flow of chromosome rearrangements from the Hominoidea Ancestor to extant Hylobates and Nomascus Gibbons by high-resolution synteny mapping.

Misceo D, Capozzi O, Roberto R, Dell'oglio MP, Rocchi M, Stanyon R, Archidiacono N.

Genome Res. 2008 Sep;18(9):1530-7. doi: 10.1101/gr.078295.108. Epub 2008 Jun 13.

4.

Sequencing human-gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites.

Girirajan S, Chen L, Graves T, Marques-Bonet T, Ventura M, Fronick C, Fulton L, Rocchi M, Fulton RS, Wilson RK, Mardis ER, Eichler EE.

Genome Res. 2009 Feb;19(2):178-90. doi: 10.1101/gr.086041.108. Epub 2008 Nov 24.

5.

Construction, characterization, and chromosomal mapping of a fosmid library of the white-cheeked gibbon (Nomascus leucogenys).

Chen L, Ye J, Liu Y, Wang J, Su W, Yang F, Nie W.

Genomics Proteomics Bioinformatics. 2007 Dec;5(3-4):207-15. doi: 10.1016/S1672-0229(08)60008-X.

6.

Molecular refinement of gibbon genome rearrangements.

Roberto R, Capozzi O, Wilson RK, Mardis ER, Lomiento M, Tuzun E, Cheng Z, Mootnick AR, Archidiacono N, Rocchi M, Eichler EE.

Genome Res. 2007 Feb;17(2):249-57. Epub 2006 Dec 21.

7.

A chromosomal inversion unique to the northern white-cheeked gibbon.

Carbone L, Mootnick AR, Nadler T, Moisson P, Ryder O, Roos C, de Jong PJ.

PLoS One. 2009;4(3):e4999. doi: 10.1371/journal.pone.0004999. Epub 2009 Mar 25.

8.

Gibbon genome and the fast karyotype evolution of small apes.

Carbone L, Harris RA, Gnerre S, Veeramah KR, Lorente-Galdos B, Huddleston J, Meyer TJ, Herrero J, Roos C, Aken B, Anaclerio F, Archidiacono N, Baker C, Barrell D, Batzer MA, Beal K, Blancher A, Bohrson CL, Brameier M, Campbell MS, Capozzi O, Casola C, Chiatante G, Cree A, Damert A, de Jong PJ, Dumas L, Fernandez-Callejo M, Flicek P, Fuchs NV, Gut I, Gut M, Hahn MW, Hernandez-Rodriguez J, Hillier LW, Hubley R, Ianc B, Izsvák Z, Jablonski NG, Johnstone LM, Karimpour-Fard A, Konkel MK, Kostka D, Lazar NH, Lee SL, Lewis LR, Liu Y, Locke DP, Mallick S, Mendez FL, Muffato M, Nazareth LV, Nevonen KA, O'Bleness M, Ochis C, Odom DT, Pollard KS, Quilez J, Reich D, Rocchi M, Schumann GG, Searle S, Sikela JM, Skollar G, Smit A, Sonmez K, ten Hallers B, Terhune E, Thomas GW, Ullmer B, Ventura M, Walker JA, Wall JD, Walter L, Ward MC, Wheelan SJ, Whelan CW, White S, Wilhelm LJ, Woerner AE, Yandell M, Zhu B, Hammer MF, Marques-Bonet T, Eichler EE, Fulton L, Fronick C, Muzny DM, Warren WC, Worley KC, Rogers J, Wilson RK, Gibbs RA.

Nature. 2014 Sep 11;513(7517):195-201. doi: 10.1038/nature13679.

9.

An Alu-based phylogeny of gibbons (hylobatidae).

Meyer TJ, McLain AT, Oldenburg JM, Faulk C, Bourgeois MG, Conlin EM, Mootnick AR, de Jong PJ, Roos C, Carbone L, Batzer MA.

Mol Biol Evol. 2012 Nov;29(11):3441-50. doi: 10.1093/molbev/mss149. Epub 2012 Jun 7.

10.

A comprehensive molecular cytogenetic analysis of chromosome rearrangements in gibbons.

Capozzi O, Carbone L, Stanyon RR, Marra A, Yang F, Whelan CW, de Jong PJ, Rocchi M, Archidiacono N.

Genome Res. 2012 Dec;22(12):2520-8. doi: 10.1101/gr.138651.112. Epub 2012 Aug 14.

11.

Reconstruction of genomic rearrangements in great apes and gibbons by chromosome painting.

Jauch A, Wienberg J, Stanyon R, Arnold N, Tofanelli S, Ishida T, Cremer T.

Proc Natl Acad Sci U S A. 1992 Sep 15;89(18):8611-5.

12.

Chromosomal phylogeny and evolution of gibbons (Hylobatidae).

Müller S, Hollatz M, Wienberg J.

Hum Genet. 2003 Nov;113(6):493-501. Epub 2003 Sep 3.

PMID:
14569461
13.

Centromere remodeling in Hoolock leuconedys (Hylobatidae) by a new transposable element unique to the gibbons.

Carbone L, Harris RA, Mootnick AR, Milosavljevic A, Martin DI, Rocchi M, Capozzi O, Archidiacono N, Konkel MK, Walker JA, Batzer MA, de Jong PJ.

Genome Biol Evol. 2012;4(7):648-58. doi: 10.1093/gbe/evs048. Epub 2012 May 16.

14.

Enrichment of segmental duplications in regions of breaks of synteny between the human and mouse genomes suggest their involvement in evolutionary rearrangements.

Armengol L, Pujana MA, Cheung J, Scherer SW, Estivill X.

Hum Mol Genet. 2003 Sep 1;12(17):2201-8. Epub 2003 Jul 8.

15.

Conserved chromosome segments in Hylobates hoolock revealed by human and H. leucogenys paint probes.

Nie W, Rens W, Wang J, Yang F.

Cytogenet Cell Genet. 2001;92(3-4):248-53.

PMID:
11435697
16.

Comprehensive Analyses of White-Handed Gibbon Chromosomes Enables Access to 92 Evolutionary Conserved Breakpoints Compared to the Human Genome.

Weise A, Kosyakova N, Voigt M, Aust N, Mrasek K, Löhmer S, Rubtsov N, Karamysheva TV, Trifonov VA, Hardekopf D, Jančušková T, Pekova S, Wilhelm K, Liehr T, Fan X.

Cytogenet Genome Res. 2015;145(1):42-9. doi: 10.1159/000381764. Epub 2015 Apr 24.

17.

Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions.

Gordon L, Yang S, Tran-Gyamfi M, Baggott D, Christensen M, Hamilton A, Crooijmans R, Groenen M, Lucas S, Ovcharenko I, Stubbs L.

Genome Res. 2007 Nov;17(11):1603-13. Epub 2007 Oct 5.

18.

Analysis of copy number variants and segmental duplications in the human genome: Evidence for a change in the process of formation in recent evolutionary history.

Kim PM, Lam HY, Urban AE, Korbel JO, Affourtit J, Grubert F, Chen X, Weissman S, Snyder M, Gerstein MB.

Genome Res. 2008 Dec;18(12):1865-74. doi: 10.1101/gr.081422.108. Epub 2008 Oct 8.

19.

Comparative cytogenetics of human chromosome 3q21.3 reveals a hot spot for ectopic recombination in hominoid evolution.

Yue Y, Grossmann B, Ferguson-Smith M, Yang F, Haaf T.

Genomics. 2005 Jan;85(1):36-47.

PMID:
15607420
20.

Inferring the evolutionary histories of divergences in Hylobates and Nomascus gibbons through multilocus sequence data.

Chan YC, Roos C, Inoue-Murayama M, Inoue E, Shih CC, Pei KJ, Vigilant L.

BMC Evol Biol. 2013 Apr 12;13:82. doi: 10.1186/1471-2148-13-82.

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