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Items: 1 to 20 of 493

1.

Unbiased RNA-protein interaction screen by quantitative proteomics.

Butter F, Scheibe M, Mörl M, Mann M.

Proc Natl Acad Sci U S A. 2009 Jun 30;106(26):10626-31. doi: 10.1073/pnas.0812099106. Epub 2009 Jun 16.

3.

Stable isotope labeling of Arabidopsis thaliana cells and quantitative proteomics by mass spectrometry.

Gruhler A, Schulze WX, Matthiesen R, Mann M, Jensen ON.

Mol Cell Proteomics. 2005 Nov;4(11):1697-709. Epub 2005 Aug 8.

4.

Posttranscriptional control of renin synthesis: identification of proteins interacting with renin mRNA 3'-untranslated region.

Skalweit A, Doller A, Huth A, Kähne T, Persson PB, Thiele BJ.

Circ Res. 2003 Mar 7;92(4):419-27. Epub 2003 Jan 30.

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6.

Phosphoproteome analysis of HeLa cells using stable isotope labeling with amino acids in cell culture (SILAC).

Amanchy R, Kalume DE, Iwahori A, Zhong J, Pandey A.

J Proteome Res. 2005 Sep-Oct;4(5):1661-71.

PMID:
16212419
7.

A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling.

Blagoev B, Kratchmarova I, Ong SE, Nielsen M, Foster LJ, Mann M.

Nat Biotechnol. 2003 Mar;21(3):315-8. Epub 2003 Feb 10.

PMID:
12577067
8.

Identification of a target RNA motif for RNA-binding protein HuR.

López de Silanes I, Zhan M, Lal A, Yang X, Gorospe M.

Proc Natl Acad Sci U S A. 2004 Mar 2;101(9):2987-92. Epub 2004 Feb 23.

9.

Mapping the integrin-linked kinase interactome using SILAC.

Dobreva I, Fielding A, Foster LJ, Dedhar S.

J Proteome Res. 2008 Apr;7(4):1740-9. doi: 10.1021/pr700852r. Epub 2008 Mar 10.

PMID:
18327965
10.

Stability of casein mRNA is ensured by structural interactions between the 3'-untranslated region and poly(A) tail via the HuR and poly(A)-binding protein complex.

Nagaoka K, Suzuki T, Kawano T, Imakawa K, Sakai S.

Biochim Biophys Acta. 2006 Mar-Apr;1759(3-4):132-40. Epub 2006 Apr 20.

PMID:
16714065
11.

The stem-loop binding protein forms a highly stable and specific complex with the 3' stem-loop of histone mRNAs.

Battle DJ, Doudna JA.

RNA. 2001 Jan;7(1):123-32. Erratum in: RNA 2001 Apr;7(4):642-3.

12.

In vitro selection of an RNA sequence that interacts with high affinity with thymidylate synthase.

Lin X, Mizunuma N, Chen T, Copur SM, Maley GF, Liu J, Maley F, Chu E.

Nucleic Acids Res. 2000 Nov 1;28(21):4266-74.

13.

Stable isotope labeling by amino acids in cell culture (SILAC).

Gruhler S, Kratchmarova I.

Methods Mol Biol. 2008;424:101-11. doi: 10.1007/978-1-60327-064-9_9.

PMID:
18369856
14.

Quantitative proteomics using stable isotope labeling with amino acids in cell culture.

Harsha HC, Molina H, Pandey A.

Nat Protoc. 2008;3(3):505-16. doi: 10.1038/nprot.2008.2.

PMID:
18323819
15.

Functional and quantitative proteomics using SILAC.

Mann M.

Nat Rev Mol Cell Biol. 2006 Dec;7(12):952-8.

PMID:
17139335
16.

Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3' UTR structures.

Ward AM, Bidet K, Yinglin A, Ler SG, Hogue K, Blackstock W, Gunaratne J, Garcia-Blanco MA.

RNA Biol. 2011 Nov-Dec;8(6):1173-86. doi: 10.4161/rna.8.6.17836. Epub 2011 Nov 1.

17.

3'-Untranslated region of doublecortin mRNA is a binding target of the Musashi1 RNA-binding protein.

Horisawa K, Imai T, Okano H, Yanagawa H.

FEBS Lett. 2009 Jul 21;583(14):2429-34. doi: 10.1016/j.febslet.2009.06.045. Epub 2009 Jun 30.

18.

Identification of phosphorylation-dependent interaction partners of the adapter protein ADAP using quantitative mass spectrometry: SILAC vs (18)O-labeling.

Lange S, Sylvester M, Schümann M, Freund C, Krause E.

J Proteome Res. 2010 Aug 6;9(8):4113-22. doi: 10.1021/pr1003054.

PMID:
20568816
19.

A sequence predicted to form a stem-loop is proposed to be required for formation of an RNA-protein complex involving the 3'UTR of beta-subunit F0F1-ATPase mRNA.

Kramarova TV, Antonicka H, Houstek J, Cannon B, Nedergaard J.

Biochim Biophys Acta. 2008 Jul-Aug;1777(7-8):747-57. doi: 10.1016/j.bbabio.2008.05.446. Epub 2008 Jun 4.

20.
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