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Results: 1 to 20 of 412

1.

A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley.

Wicker T, Taudien S, Houben A, Keller B, Graner A, Platzer M, Stein N.

Plant J. 2009 Sep;59(5):712-22. doi: 10.1111/j.1365-313X.2009.03911.x. Epub 2009 May 12.

PMID:
19453446
[PubMed - indexed for MEDLINE]
2.

Updating of transposable element annotations from large wheat genomic sequences reveals diverse activities and gene associations.

Sabot F, Guyot R, Wicker T, Chantret N, Laubin B, Chalhoub B, Leroy P, Sourdille P, Bernard M.

Mol Genet Genomics. 2005 Sep;274(2):119-30. Epub 2005 Oct 11.

PMID:
16034625
[PubMed - indexed for MEDLINE]
3.

Analysis of intraspecies diversity in wheat and barley genomes identifies breakpoints of ancient haplotypes and provides insight into the structure of diploid and hexaploid triticeae gene pools.

Wicker T, Krattinger SG, Lagudah ES, Komatsuda T, Pourkheirandish M, Matsumoto T, Cloutier S, Reiser L, Kanamori H, Sato K, Perovic D, Stein N, Keller B.

Plant Physiol. 2009 Jan;149(1):258-70. doi: 10.1104/pp.108.129734. Epub 2008 Nov 14.

PMID:
19011002
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Structural organization of the barley D-hordein locus in comparison with its orthologous regions of wheat genomes.

Gu YQ, Anderson OD, Londeorë CF, Kong X, Chibbar RN, Lazo GR.

Genome. 2003 Dec;46(6):1084-97.

PMID:
14663527
[PubMed - indexed for MEDLINE]
5.

Characterizing the composition and evolution of homoeologous genomes in hexaploid wheat through BAC-end sequencing on chromosome 3B.

Paux E, Roger D, Badaeva E, Gay G, Bernard M, Sourdille P, Feuillet C.

Plant J. 2006 Nov;48(3):463-74. Epub 2006 Sep 29.

PMID:
17010109
[PubMed - indexed for MEDLINE]
6.

Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats.

Wicker T, Narechania A, Sabot F, Stein J, Vu GT, Graner A, Ware D, Stein N.

BMC Genomics. 2008 Oct 31;9:518. doi: 10.1186/1471-2164-9-518.

PMID:
18976483
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome.

Lyons M, Cardle L, Rostoks N, Waugh R, Flavell AJ.

Mol Genet Genomics. 2008 Oct;280(4):275-85. doi: 10.1007/s00438-008-0363-0. Epub 2008 Jul 9.

PMID:
18612649
[PubMed - indexed for MEDLINE]
8.

Analysis of a contiguous 211 kb sequence in diploid wheat (Triticum monococcum L.) reveals multiple mechanisms of genome evolution.

Wicker T, Stein N, Albar L, Feuillet C, Schlagenhauf E, Keller B.

Plant J. 2001 May;26(3):307-16.

PMID:
11439119
[PubMed - indexed for MEDLINE]
9.

454 sequencing put to the test using the complex genome of barley.

Wicker T, Schlagenhauf E, Graner A, Close TJ, Keller B, Stein N.

BMC Genomics. 2006 Oct 26;7:275.

PMID:
17067373
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Comparative sequence analysis of the phytochrome C gene and its upstream region in allohexaploid wheat reveals new data on the evolution of its three constituent genomes.

Devos KM, Beales J, Ogihara Y, Doust AN.

Plant Mol Biol. 2005 Jul;58(5):625-41.

PMID:
16158239
[PubMed - indexed for MEDLINE]
11.

Effective isolation of retrotransposons and repetitive DNA families from the wheat genome.

Tomita M, Asao M, Kuraki A.

J Integr Plant Biol. 2010 Jul;52(7):679-91. doi: 10.1111/j.1744-7909.2010.00954.x.

PMID:
20590997
[PubMed - indexed for MEDLINE]
12.

Further evidence of microcolinearity between barley and rice genomes at two orthologous regions.

Park YJ, Dixit A, Yoo JW, Bennetzen J.

Mol Cells. 2004 Jun 30;17(3):492-502.

PMID:
15232225
[PubMed - indexed for MEDLINE]
Free Article
13.

Cloning and characterization of a highly repeated DNA sequence in Hordeum vulgare L.

Liu K, Somerville S.

Genome. 1996 Dec;39(6):1159-68.

PMID:
8983185
[PubMed - indexed for MEDLINE]
14.

Barley elongation factor 1 alpha: genomic organization, DNA sequence, and phylogenetic implications.

Nielsen PS, Kleinhofs A, Olsen OA.

Genome. 1997 Aug;40(4):559-65.

PMID:
9276939
[PubMed - indexed for MEDLINE]
15.

Evolutionary analysis of the CACTA DNA-transposon Caspar across wheat species using sequence comparison and in situ hybridization.

Sergeeva EM, Salina EA, Adonina IG, Chalhoub B.

Mol Genet Genomics. 2010 Jul;284(1):11-23. doi: 10.1007/s00438-010-0544-5. Epub 2010 May 29.

PMID:
20512353
[PubMed - indexed for MEDLINE]
16.

Diversification of the barley and wheat blt101/wpi6 promoters by the Xumet element without affecting stress responsiveness.

Koike M, Kato H, Imai R.

Mol Genet Genomics. 2008 Jul;280(1):41-7. doi: 10.1007/s00438-008-0343-4. Epub 2008 Apr 30.

PMID:
18446373
[PubMed - indexed for MEDLINE]
17.

Rice transposable elements are characterized by various methylation environments in the genome.

Takata M, Kiyohara A, Takasu A, Kishima Y, Ohtsubo H, Sano Y.

BMC Genomics. 2007 Dec 20;8:469.

PMID:
18093338
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Rapid development of PCR-based genome-specific repetitive DNA junction markers in wheat.

Wanjugi H, Coleman-Derr D, Huo N, Kianian SF, Luo MC, Wu J, Anderson O, Gu YQ.

Genome. 2009 Jun;52(6):576-87. doi: 10.1139/g09-033.

PMID:
19483776
[PubMed - indexed for MEDLINE]
19.

Large intraspecific haplotype variability at the Rph7 locus results from rapid and recent divergence in the barley genome.

Scherrer B, Isidore E, Klein P, Kim JS, Bellec A, Chalhoub B, Keller B, Feuillet C.

Plant Cell. 2005 Feb;17(2):361-74. Epub 2005 Jan 19.

PMID:
15659632
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Contrasted microcolinearity and gene evolution within a homoeologous region of wheat and barley species.

Chantret N, Salse J, Sabot F, Bellec A, Laubin B, Dubois I, Dossat C, Sourdille P, Joudrier P, Gautier MF, Cattolico L, Beckert M, Aubourg S, Weissenbach J, Caboche M, Leroy P, Bernard M, Chalhoub B.

J Mol Evol. 2008 Feb;66(2):138-50. doi: 10.1007/s00239-008-9066-8. Epub 2008 Feb 15.

PMID:
18274696
[PubMed - indexed for MEDLINE]

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