Similar articles for PMID: 19419536

Year	Number of Results
2001	1
2002	4
2003	4
2004	10
2005	15
2006	8
2007	12
2008	8
2009	12
2010	7
2011	3
2012	5
2013	1
2014	1
2015	1
2016	2
2017	1
2024	0

1

SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip.

Fujisawa H, Horiuchi Y, Harushima Y, Takada T, Eguchi S, Mochizuki T, Sakaguchi T, Shiroishi T, Kurata N. Fujisawa H, et al. BMC Bioinformatics. 2009 May 6;10:131. doi: 10.1186/1471-2105-10-131. BMC Bioinformatics. 2009. PMID: 19419536 Free PMC article.

2

A simple optimization can improve the performance of single feature polymorphism detection by Affymetrix expression arrays.

Horiuchi Y, Harushima Y, Fujisawa H, Mochizuki T, Kawakita M, Sakaguchi T, Kurata N. Horiuchi Y, et al. BMC Genomics. 2010 May 20;11:315. doi: 10.1186/1471-2164-11-315. BMC Genomics. 2010. PMID: 20482895 Free PMC article.

3

Equalizer reduces SNP bias in Affymetrix microarrays.

Quigley D. Quigley D. BMC Bioinformatics. 2015 Jul 30;16(1):238. doi: 10.1186/s12859-015-0669-y. BMC Bioinformatics. 2015. PMID: 26223252 Free PMC article.

4

AffyMAPSDetector: a software tool to characterize Affymetrix GeneChip expression arrays with respect to SNPs.

Kumari S, Verma LK, Weller JW. Kumari S, et al. BMC Bioinformatics. 2007 Jul 30;8:276. doi: 10.1186/1471-2105-8-276. BMC Bioinformatics. 2007. PMID: 17663786 Free PMC article.

5

Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model.

Sásik R, Calvo E, Corbeil J. Sásik R, et al. Bioinformatics. 2002 Dec;18(12):1633-40. doi: 10.1093/bioinformatics/18.12.1633. Bioinformatics. 2002. PMID: 12490448

6

Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.

Seo J, Bakay M, Chen YW, Hilmer S, Shneiderman B, Hoffman EP. Seo J, et al. Bioinformatics. 2004 Nov 1;20(16):2534-44. doi: 10.1093/bioinformatics/bth280. Epub 2004 Apr 29. Bioinformatics. 2004. PMID: 15117752

7

Transcript profiling and expression level mapping.

Potokina E, Druka A, Kearsey MJ. Potokina E, et al. Methods Mol Biol. 2009;513:81-92. doi: 10.1007/978-1-59745-427-8_5. Methods Mol Biol. 2009. PMID: 19347647

8

Single-feature polymorphism discovery in the barley transcriptome.

Rostoks N, Borevitz JO, Hedley PE, Russell J, Mudie S, Morris J, Cardle L, Marshall DF, Waugh R. Rostoks N, et al. Genome Biol. 2005;6(6):R54. doi: 10.1186/gb-2005-6-6-r54. Epub 2005 May 11. Genome Biol. 2005. PMID: 15960806 Free PMC article.

9

Algorithms for large-scale genotyping microarrays.

Liu WM, Di X, Yang G, Matsuzaki H, Huang J, Mei R, Ryder TB, Webster TA, Dong S, Liu G, Jones KW, Kennedy GC, Kulp D. Liu WM, et al. Bioinformatics. 2003 Dec 12;19(18):2397-403. doi: 10.1093/bioinformatics/btg332. Bioinformatics. 2003. PMID: 14668223

10

Methods for evaluating gene expression from Affymetrix microarray datasets.

Jiang N, Leach LJ, Hu X, Potokina E, Jia T, Druka A, Waugh R, Kearsey MJ, Luo ZW. Jiang N, et al. BMC Bioinformatics. 2008 Jun 17;9:284. doi: 10.1186/1471-2105-9-284. BMC Bioinformatics. 2008. PMID: 18559105 Free PMC article.

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