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Results: 1 to 20 of 76

1.

Contrast features of CpG islands in the promoter and other regions in the dog genome.

Han L, Zhao Z.

Genomics. 2009 Aug;94(2):117-24. doi: 10.1016/j.ygeno.2009.04.007. Epub 2009 May 3.

PMID:
19409480
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Features and trend of loss of promoter-associated CpG islands in the human and mouse genomes.

Jiang C, Han L, Su B, Li WH, Zhao Z.

Mol Biol Evol. 2007 Sep;24(9):1991-2000. Epub 2007 Jun 24.

PMID:
17591602
[PubMed - indexed for MEDLINE]
Free Article
3.

Identifying CpG islands by different computational techniques.

Hutter B, Paulsen M, Helms V.

OMICS. 2009 Apr;13(2):153-64. doi: 10.1089/omi.2008.0046.

PMID:
19196100
[PubMed - indexed for MEDLINE]
4.

CpG island density and its correlations with genomic features in mammalian genomes.

Han L, Su B, Li WH, Zhao Z.

Genome Biol. 2008;9(5):R79. doi: 10.1186/gb-2008-9-5-r79. Epub 2008 May 13.

PMID:
18477403
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

CpG islands or CpG clusters: how to identify functional GC-rich regions in a genome?

Han L, Zhao Z.

BMC Bioinformatics. 2009 Feb 20;10:65. doi: 10.1186/1471-2105-10-65.

PMID:
19232104
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

CpG islands: algorithms and applications in methylation studies.

Zhao Z, Han L.

Biochem Biophys Res Commun. 2009 May 15;382(4):643-5. doi: 10.1016/j.bbrc.2009.03.076. Epub 2009 Mar 18. Review.

PMID:
19302978
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

CpG_MI: a novel approach for identifying functional CpG islands in mammalian genomes.

Su J, Zhang Y, Lv J, Liu H, Tang X, Wang F, Qi Y, Feng Y, Li X.

Nucleic Acids Res. 2010 Jan;38(1):e6. doi: 10.1093/nar/gkp882. Epub 2009 Oct 23.

PMID:
19854943
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Orphan CpG islands identify numerous conserved promoters in the mammalian genome.

Illingworth RS, Gruenewald-Schneider U, Webb S, Kerr AR, James KD, Turner DJ, Smith C, Harrison DJ, Andrews R, Bird AP.

PLoS Genet. 2010 Sep 23;6(9):e1001134. doi: 10.1371/journal.pgen.1001134.

PMID:
20885785
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

CpGcluster: a distance-based algorithm for CpG-island detection.

Hackenberg M, Previti C, Luque-Escamilla PL, Carpena P, Martínez-Aroza J, Oliver JL.

BMC Bioinformatics. 2006 Oct 12;7:446.

PMID:
17038168
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Comparative analysis of CpG islands in four fish genomes.

Han L, Zhao Z.

Comp Funct Genomics. 2008:565631. doi: 10.1155/2008/565631.

PMID:
18483567
[PubMed]
Free PMC Article
11.

Frequent hypomethylation in multiple promoter CpG islands is associated with global hypomethylation, but not with frequent promoter hypermethylation.

Kaneda A, Tsukamoto T, Takamura-Enya T, Watanabe N, Kaminishi M, Sugimura T, Tatematsu M, Ushijima T.

Cancer Sci. 2004 Jan;95(1):58-64.

PMID:
14720328
[PubMed - indexed for MEDLINE]
12.

The properties of CpG islands in the putative promoter regions of human immunoglobulin (Ig) genes.

Liu GB, Yan H, Jiang YF, Chen R, Pettigrew JD, Zhao KN.

Gene. 2005 Sep 26;358:127-38.

PMID:
16112518
[PubMed - indexed for MEDLINE]
13.

Divergence of CpG island promoters: a consequence or cause of evolution?

Sharif J, Endo TA, Toyoda T, Koseki H.

Dev Growth Differ. 2010 Aug;52(6):545-54. doi: 10.1111/j.1440-169X.2010.01193.x.

PMID:
20646027
[PubMed - indexed for MEDLINE]
14.

The evolution of mammalian genomic imprinting was accompanied by the acquisition of novel CpG islands.

Suzuki S, Shaw G, Kaneko-Ishino T, Ishino F, Renfree MB.

Genome Biol Evol. 2011;3:1276-83. doi: 10.1093/gbe/evr104. Epub 2011 Oct 19.

PMID:
22016334
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

CpG islands--'a rough guide'.

Illingworth RS, Bird AP.

FEBS Lett. 2009 Jun 5;583(11):1713-20. doi: 10.1016/j.febslet.2009.04.012. Epub 2009 Apr 18. Review.

PMID:
19376112
[PubMed - indexed for MEDLINE]
Free Article
16.

Isolation and enrichment of human genomic CpG islands by methylation-sensitive mirror orientation selection.

Huang Q, Baum L, Huang JF, You JP, Wang F, Wang J, Zheng J, Yan XC, Xia H, Zhao YH, Kuang H, Fu WL.

Anal Biochem. 2007 Jun 15;365(2):153-64. Epub 2007 Apr 2.

PMID:
17481566
[PubMed - indexed for MEDLINE]
17.

A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters.

Saxonov S, Berg P, Brutlag DL.

Proc Natl Acad Sci U S A. 2006 Jan 31;103(5):1412-7. Epub 2006 Jan 23.

PMID:
16432200
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

CpG Island microarray probe sequences derived from a physical library are representative of CpG Islands annotated on the human genome.

Heisler LE, Torti D, Boutros PC, Watson J, Chan C, Winegarden N, Takahashi M, Yau P, Huang TH, Farnham PJ, Jurisica I, Woodgett JR, Bremner R, Penn LZ, Der SD.

Nucleic Acids Res. 2005 May 23;33(9):2952-61. Print 2005.

PMID:
15911630
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

CpG islands as gene markers in the human genome.

Larsen F, Gundersen G, Lopez R, Prydz H.

Genomics. 1992 Aug;13(4):1095-107.

PMID:
1505946
[PubMed - indexed for MEDLINE]
20.

A NotI-EcoRV promoter library for studies of genetic and epigenetic alterations in mouse models of human malignancies.

Yu L, Liu C, Bennett K, Wu YZ, Dai Z, Vandeusen J, Opavsky R, Raval A, Trikha P, Rodriguez B, Becknell B, Mao C, Lee S, Davuluri RV, Leone G, Van den Veyver IB, Caligiuri MA, Plass C.

Genomics. 2004 Oct;84(4):647-60.

PMID:
15475242
[PubMed - indexed for MEDLINE]

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