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Items: 1 to 20 of 130

1.

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.

Bovine HapMap Consortium, Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, Weinstock GM, Wheeler DA, Ajmone-Marsan P, Boettcher PJ, Caetano AR, Garcia JF, Hanotte O, Mariani P, Skow LC, Sonstegard TS, Williams JL, Diallo B, Hailemariam L, Martinez ML, Morris CA, Silva LO, Spelman RJ, Mulatu W, Zhao K, Abbey CA, Agaba M, Araujo FR, Bunch RJ, Burton J, Gorni C, Olivier H, Harrison BE, Luff B, Machado MA, Mwakaya J, Plastow G, Sim W, Smith T, Thomas MB, Valentini A, Williams P, Womack J, Woolliams JA, Liu Y, Qin X, Worley KC, Gao C, Jiang H, Moore SS, Ren Y, Song XZ, Bustamante CD, Hernandez RD, Muzny DM, Patil S, San Lucas A, Fu Q, Kent MP, Vega R, Matukumalli A, McWilliam S, Sclep G, Bryc K, Choi J, Gao H, Grefenstette JJ, Murdoch B, Stella A, Villa-Angulo R, Wright M, Aerts J, Jann O, Negrini R, Goddard ME, Hayes BJ, Bradley DG, Barbosa da Silva M, Lau LP, Liu GE, Lynn DJ, Panzitta F, Dodds KG.

Science. 2009 Apr 24;324(5926):528-32. doi: 10.1126/science.1167936.

2.

A genome-wide scan for signatures of differential artificial selection in ten cattle breeds.

Rothammer S, Seichter D, Förster M, Medugorac I.

BMC Genomics. 2013 Dec 21;14:908. doi: 10.1186/1471-2164-14-908.

4.

The genome-wide structure of two economically important indigenous Sicilian cattle breeds.

Mastrangelo S, Saura M, Tolone M, Salces-Ortiz J, Di Gerlando R, Bertolini F, Fontanesi L, Sardina MT, Serrano M, Portolano B.

J Anim Sci. 2014 Nov;92(11):4833-42. doi: 10.2527/jas.2014-7898. Epub 2014 Sep 24.

5.

High-resolution haplotype block structure in the cattle genome.

Villa-Angulo R, Matukumalli LK, Gill CA, Choi J, Van Tassell CP, Grefenstette JJ.

BMC Genet. 2009 Apr 24;10:19. doi: 10.1186/1471-2156-10-19.

6.

An assessment of population structure in eight breeds of cattle using a whole genome SNP panel.

McKay SD, Schnabel RD, Murdoch BM, Matukumalli LK, Aerts J, Coppieters W, Crews D, Dias Neto E, Gill CA, Gao C, Mannen H, Wang Z, Van Tassell CP, Williams JL, Taylor JF, Moore SS.

BMC Genet. 2008 May 20;9:37. doi: 10.1186/1471-2156-9-37.

7.

Detection of selection signatures in dairy and beef cattle using high-density genomic information.

Zhao F, McParland S, Kearney F, Du L, Berry DP.

Genet Sel Evol. 2015 Jun 19;47:49. doi: 10.1186/s12711-015-0127-3.

8.

Genome-wide genetic diversity, population structure and admixture analysis in African and Asian cattle breeds.

Edea Z, Bhuiyan MS, Dessie T, Rothschild MF, Dadi H, Kim KS.

Animal. 2015 Feb;9(2):218-26. doi: 10.1017/S1751731114002560. Epub 2014 Oct 31.

PMID:
25359181
9.

Genome-wide association analysis for quantitative trait loci influencing Warner-Bratzler shear force in five taurine cattle breeds.

McClure MC, Ramey HR, Rolf MM, McKay SD, Decker JE, Chapple RH, Kim JW, Taxis TM, Weaber RL, Schnabel RD, Taylor JF.

Anim Genet. 2012 Dec;43(6):662-73. doi: 10.1111/j.1365-2052.2012.02323.x. Epub 2012 Feb 27.

10.

Comparison of molecular breeding values based on within- and across-breed training in beef cattle.

Kachman SD, Spangler ML, Bennett GL, Hanford KJ, Kuehn LA, Snelling WM, Thallman RM, Saatchi M, Garrick DJ, Schnabel RD, Taylor JF, Pollak EJ.

Genet Sel Evol. 2013 Aug 16;45:30. doi: 10.1186/1297-9686-45-30.

11.

High-density marker imputation accuracy in sixteen French cattle breeds.

Hozé C, Fouilloux MN, Venot E, Guillaume F, Dassonneville R, Fritz S, Ducrocq V, Phocas F, Boichard D, Croiseau P.

Genet Sel Evol. 2013 Sep 3;45:33. doi: 10.1186/1297-9686-45-33.

12.

Genetic diversity of European cattle breeds highlights the conservation value of traditional unselected breeds with high effective population size.

Medugorac I, Medugorac A, Russ I, Veit-Kensch CE, Taberlet P, Luntz B, Mix HM, Förster M.

Mol Ecol. 2009 Aug;18(16):3394-410. doi: 10.1111/j.1365-294X.2009.04286.x. Epub 2009 Jul 31.

PMID:
19659482
13.

Genome wide signatures of positive selection: the comparison of independent samples and the identification of regions associated to traits.

Barendse W, Harrison BE, Bunch RJ, Thomas MB, Turner LB.

BMC Genomics. 2009 Apr 24;10:178. doi: 10.1186/1471-2164-10-178.

14.

Application of site and haplotype-frequency based approaches for detecting selection signatures in cattle.

Qanbari S, Gianola D, Hayes B, Schenkel F, Miller S, Moore S, Thaller G, Simianer H.

BMC Genomics. 2011 Jun 16;12:318. doi: 10.1186/1471-2164-12-318.

15.

Relationships between Podolic cattle breeds assessed by single nucleotide polymorphisms (SNPs) genotyping.

Pariset L, Mariotti M, Nardone A, Soysal MI, Ozkan E, Williams JL, Dunner S, Leveziel H, Maróti-Agóts A, Bodò I, Valentini A.

J Anim Breed Genet. 2010 Dec;127(6):481-8. doi: 10.1111/j.1439-0388.2010.00868.x. Epub 2010 Oct 28.

PMID:
21077972
16.

Signatures of selection in five Italian cattle breeds detected by a 54K SNP panel.

Mancini G, Gargani M, Chillemi G, Nicolazzi EL, Marsan PA, Valentini A, Pariset L.

Mol Biol Rep. 2014 Feb;41(2):957-65. doi: 10.1007/s11033-013-2940-5. Epub 2014 Jan 19.

17.

Insights into the genetic history of French cattle from dense SNP data on 47 worldwide breeds.

Gautier M, Laloë D, Moazami-Goudarzi K.

PLoS One. 2010 Sep 30;5(9). pii: e13038. doi: 10.1371/journal.pone.0013038. Erratum in: PLoS One. 2011;6(1). doi: 10.1371/annotation/ee4e4e98-80fc-4724-a96b-891cf652b9e1. PLoS One. 2011;6(1). doi: 10.1371/annotation/84c8c4fa-031d-4a7a-8c09-2619627fc387.

18.

New World cattle show ancestry from multiple independent domestication events.

McTavish EJ, Decker JE, Schnabel RD, Taylor JF, Hillis DM.

Proc Natl Acad Sci U S A. 2013 Apr 9;110(15):E1398-406. doi: 10.1073/pnas.1303367110. Epub 2013 Mar 25.

19.

Detection of selective sweeps in cattle using genome-wide SNP data.

Ramey HR, Decker JE, McKay SD, Rolf MM, Schnabel RD, Taylor JF.

BMC Genomics. 2013 Jun 7;14:382. doi: 10.1186/1471-2164-14-382.

20.

Whole-Genome Resequencing Analysis of Hanwoo and Yanbian Cattle to Identify Genome-Wide SNPs and Signatures of Selection.

Choi JW, Choi BH, Lee SH, Lee SS, Kim HC, Yu D, Chung WH, Lee KT, Chai HH, Cho YM, Lim D.

Mol Cells. 2015 May;38(5):466-73. doi: 10.14348/molcells.2015.0019. Epub 2015 May 15.

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