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Genomic expression profiling of mature soybean (Glycine max) pollen.

Haerizadeh F, Wong CE, Bhalla PL, Gresshoff PM, Singh MB.

BMC Plant Biol. 2009 Mar 6;9:25. doi: 10.1186/1471-2229-9-25.


Genome-scale analysis and comparison of gene expression profiles in developing and germinated pollen in Oryza sativa.

Wei LQ, Xu WY, Deng ZY, Su Z, Xue Y, Wang T.

BMC Genomics. 2010 May 28;11:338. doi: 10.1186/1471-2164-11-338.


Transcriptome analysis of haploid male gametophyte development in Arabidopsis.

Honys D, Twell D.

Genome Biol. 2004;5(11):R85. Epub 2004 Oct 27.


Whole genome analysis of gene expression reveals coordinated activation of signaling and metabolic pathways during pollen-pistil interactions in Arabidopsis.

Boavida LC, Borges F, Becker JD, Feijó JA.

Plant Physiol. 2011 Apr;155(4):2066-80. doi: 10.1104/pp.110.169813. Epub 2011 Feb 11.


Identification of genes specifically or preferentially expressed in maize silk reveals similarity and diversity in transcript abundance of different dry stigmas.

Xu XH, Chen H, Sang YL, Wang F, Ma JP, Gao XQ, Zhang XS.

BMC Genomics. 2012 Jul 2;13:294. doi: 10.1186/1471-2164-13-294.


Transcript profiling of common bean (Phaseolus vulgaris L.) using the GeneChip Soybean Genome Array: optimizing analysis by masking biased probes.

Yang SS, Valdés-López O, Xu WW, Bucciarelli B, Gronwald JW, Hernández G, Vance CP.

BMC Plant Biol. 2010 May 7;10:85. doi: 10.1186/1471-2229-10-85.


Differential gene expression in soybean leaf tissues at late developmental stages under drought stress revealed by genome-wide transcriptome analysis.

Le DT, Nishiyama R, Watanabe Y, Tanaka M, Seki M, Ham le H, Yamaguchi-Shinozaki K, Shinozaki K, Tran LS.

PLoS One. 2012;7(11):e49522. doi: 10.1371/journal.pone.0049522. Epub 2012 Nov 19.


Large-scale analysis of putative soybean regulatory gene expression identifies a Myb gene involved in soybean nodule development.

Libault M, Joshi T, Takahashi K, Hurley-Sommer A, Puricelli K, Blake S, Finger RE, Taylor CG, Xu D, Nguyen HT, Stacey G.

Plant Physiol. 2009 Nov;151(3):1207-20. doi: 10.1104/pp.109.144030. Epub 2009 Sep 15.


Comparative analysis of the Arabidopsis pollen transcriptome.

Honys D, Twell D.

Plant Physiol. 2003 Jun;132(2):640-52.


An integrated transcriptome atlas of the crop model Glycine max, and its use in comparative analyses in plants.

Libault M, Farmer A, Joshi T, Takahashi K, Langley RJ, Franklin LD, He J, Xu D, May G, Stacey G.

Plant J. 2010 Jul 1;63(1):86-99. doi: 10.1111/j.1365-313X.2010.04222.x. Epub 2010 Apr 7.


Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome.

Becker JD, Boavida LC, Carneiro J, Haury M, Feijó JA.

Plant Physiol. 2003 Oct;133(2):713-25. Epub 2003 Sep 18.


Using RNA-Seq to profile soybean seed development from fertilization to maturity.

Jones SI, Vodkin LO.

PLoS One. 2013;8(3):e59270. doi: 10.1371/journal.pone.0059270. Epub 2013 Mar 15.


Comparative transcriptomics of Arabidopsis sperm cells.

Borges F, Gomes G, Gardner R, Moreno N, McCormick S, Feijó JA, Becker JD.

Plant Physiol. 2008 Oct;148(2):1168-81. doi: 10.1104/pp.108.125229. Epub 2008 Jul 30.


High level transgenic expression of soybean (Glycine max) GmERF and Gmubi gene promoters isolated by a novel promoter analysis pipeline.

Hernandez-Garcia CM, Bouchard RA, Rushton PJ, Jones ML, Chen X, Timko MP, Finer JJ.

BMC Plant Biol. 2010 Nov 4;10:237. doi: 10.1186/1471-2229-10-237.


Differential expression of genes in soybean in response to the causal agent of Asian soybean rust (Phakopsora pachyrhizi Sydow) is soybean growth stage-specific.

Panthee DR, Marois JJ, Wright DL, Narváez D, Yuan JS, Stewart CN Jr.

Theor Appl Genet. 2009 Jan;118(2):359-70. doi: 10.1007/s00122-008-0905-1. Epub 2008 Oct 14.


RNA-seq analyses of multiple meristems of soybean: novel and alternative transcripts, evolutionary and functional implications.

Wang L, Cao C, Ma Q, Zeng Q, Wang H, Cheng Z, Zhu G, Qi J, Ma H, Nian H, Wang Y.

BMC Plant Biol. 2014 Jun 17;14:169. doi: 10.1186/1471-2229-14-169.


Whole genome co-expression analysis of soybean cytochrome P450 genes identifies nodulation-specific P450 monooxygenases.

Guttikonda SK, Trupti J, Bisht NC, Chen H, An YQ, Pandey S, Xu D, Yu O.

BMC Plant Biol. 2010 Nov 9;10:243. doi: 10.1186/1471-2229-10-243.


In silico comparison of transcript abundances during Arabidopsis thaliana and Glycine max resistance to Fusarium virguliforme.

Yuan J, Zhu M, Lightfoot DA, Iqbal MJ, Yang JY, Meksem K.

BMC Genomics. 2008 Sep 16;9 Suppl 2:S6. doi: 10.1186/1471-2164-9-S2-S6.


Identification of wild soybean (Glycine soja) TIFY family genes and their expression profiling analysis under bicarbonate stress.

Zhu D, Bai X, Luo X, Chen Q, Cai H, Ji W, Zhu Y.

Plant Cell Rep. 2013 Feb;32(2):263-72. doi: 10.1007/s00299-012-1360-7. Epub 2012 Oct 23.

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