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Items: 1 to 20 of 452

1.

An open access database of genome-wide association results.

Johnson AD, O'Donnell CJ.

BMC Med Genet. 2009 Jan 22;10:6. doi: 10.1186/1471-2350-10-6.

2.

GRASP: analysis of genotype-phenotype results from 1390 genome-wide association studies and corresponding open access database.

Leslie R, O'Donnell CJ, Johnson AD.

Bioinformatics. 2014 Jun 15;30(12):i185-94. doi: 10.1093/bioinformatics/btu273.

3.

LDGIdb: a database of gene interactions inferred from long-range strong linkage disequilibrium between pairs of SNPs.

Wang MC, Chen FC, Chen YZ, Huang YT, Chuang TJ.

BMC Res Notes. 2012 May 2;5:212. doi: 10.1186/1756-0500-5-212.

4.

Snat: a SNP annotation tool for bovine by integrating various sources of genomic information.

Jiang J, Jiang L, Zhou B, Fu W, Liu JF, Zhang Q.

BMC Genet. 2011 Oct 7;12:85. doi: 10.1186/1471-2156-12-85.

5.

GWAS Integrator: a bioinformatics tool to explore human genetic associations reported in published genome-wide association studies.

Yu W, Yesupriya A, Wulf A, Hindorff LA, Dowling N, Khoury MJ, Gwinn M.

Eur J Hum Genet. 2011 Oct;19(10):1095-9. doi: 10.1038/ejhg.2011.91. Epub 2011 May 25.

6.

SNP-based pathway enrichment analysis for genome-wide association studies.

Weng L, Macciardi F, Subramanian A, Guffanti G, Potkin SG, Yu Z, Xie X.

BMC Bioinformatics. 2011 Apr 15;12:99. doi: 10.1186/1471-2105-12-99.

7.

Poor replication of candidate genes for major depressive disorder using genome-wide association data.

Bosker FJ, Hartman CA, Nolte IM, Prins BP, Terpstra P, Posthuma D, van Veen T, Willemsen G, DeRijk RH, de Geus EJ, Hoogendijk WJ, Sullivan PF, Penninx BW, Boomsma DI, Snieder H, Nolen WA.

Mol Psychiatry. 2011 May;16(5):516-32. doi: 10.1038/mp.2010.38. Epub 2010 Mar 30.

PMID:
20351714
8.

Identification of homogeneous genetic architecture of multiple genetically correlated traits by block clustering of genome-wide associations.

Gupta M, Cheung CL, Hsu YH, Demissie S, Cupples LA, Kiel DP, Karasik D.

J Bone Miner Res. 2011 Jun;26(6):1261-71. doi: 10.1002/jbmr.333.

9.

Design considerations for genetic linkage and association studies.

Nsengimana J, Bishop DT.

Methods Mol Biol. 2012;850:237-62. doi: 10.1007/978-1-61779-555-8_13.

PMID:
22307702
10.

Integrative pathway analysis of genome-wide association studies and gene expression data in prostate cancer.

Jia P, Liu Y, Zhao Z.

BMC Syst Biol. 2012;6 Suppl 3:S13. doi: 10.1186/1752-0509-6-S3-S13. Epub 2012 Dec 17.

11.

Using prior information from the medical literature in GWAS of oral cancer identifies novel susceptibility variant on chromosome 4--the AdAPT method.

Johansson M, Roberts A, Chen D, Li Y, Delahaye-Sourdeix M, Aswani N, Greenwood MA, Benhamou S, Lagiou P, Holcátová I, Richiardi L, Kjaerheim K, Agudo A, Castellsagué X, Macfarlane TV, Barzan L, Canova C, Thakker NS, Conway DI, Znaor A, Healy CM, Ahrens W, Zaridze D, Szeszenia-Dabrowska N, Lissowska J, Fabiánová E, Mates IN, Bencko V, Foretova L, Janout V, Curado MP, Koifman S, Menezes A, Wünsch-Filho V, Eluf-Neto J, Boffetta P, Franceschi S, Herrero R, Fernandez Garrote L, Talamini R, Boccia S, Galan P, Vatten L, Thomson P, Zelenika D, Lathrop M, Byrnes G, Cunningham H, Brennan P, Wakefield J, McKay JD.

PLoS One. 2012;7(5):e36888. doi: 10.1371/journal.pone.0036888. Epub 2012 May 25.

12.

Genome-wide association analysis of total cholesterol and high-density lipoprotein cholesterol levels using the Framingham heart study data.

Ma L, Yang J, Runesha HB, Tanaka T, Ferrucci L, Bandinelli S, Da Y.

BMC Med Genet. 2010 Apr 6;11:55. doi: 10.1186/1471-2350-11-55.

13.

GWAS analyzer: integrating genotype, phenotype and public annotation data for genome-wide association study analysis.

Fong C, Ko DC, Wasnick M, Radey M, Miller SI, Brittnacher M.

Bioinformatics. 2010 Feb 15;26(4):560-4. doi: 10.1093/bioinformatics/btp714. Epub 2010 Jan 6.

14.

Genome-wide association scan identifies a risk locus for preeclampsia on 2q14, near the inhibin, beta B gene.

Johnson MP, Brennecke SP, East CE, Göring HH, Kent JW Jr, Dyer TD, Said JM, Roten LT, Iversen AC, Abraham LJ, Heinonen S, Kajantie E, Kere J, Kivinen K, Pouta A, Laivuori H; FINNPEC Study Group, Austgulen R, Blangero J, Moses EK.

PLoS One. 2012;7(3):e33666. doi: 10.1371/journal.pone.0033666. Epub 2012 Mar 14.

15.

Integrating pathway analysis and genetics of gene expression for genome-wide association studies.

Zhong H, Yang X, Kaplan LM, Molony C, Schadt EE.

Am J Hum Genet. 2010 Apr 9;86(4):581-91. doi: 10.1016/j.ajhg.2010.02.020. Epub 2010 Mar 25.

16.

Network-assisted investigation of combined causal signals from genome-wide association studies in schizophrenia.

Jia P, Wang L, Fanous AH, Pato CN, Edwards TL; International Schizophrenia Consortium, Zhao Z.

PLoS Comput Biol. 2012;8(7):e1002587. doi: 10.1371/journal.pcbi.1002587. Epub 2012 Jul 5.

17.

Replication of LDL GWAs hits in PROSPER/PHASE as validation for future (pharmaco)genetic analyses.

Trompet S, de Craen AJ, Postmus I, Ford I, Sattar N, Caslake M, Stott DJ, Buckley BM, Sacks F, Devlin JJ, Slagboom PE, Westendorp RG, Jukema JW; PROSPER Study Group.

BMC Med Genet. 2011 Oct 6;12:131. doi: 10.1186/1471-2350-12-131.

18.

SCAN: SNP and copy number annotation.

Gamazon ER, Zhang W, Konkashbaev A, Duan S, Kistner EO, Nicolae DL, Dolan ME, Cox NJ.

Bioinformatics. 2010 Jan 15;26(2):259-62. doi: 10.1093/bioinformatics/btp644. Epub 2009 Nov 17.

19.

Causal graph-based analysis of genome-wide association data in rheumatoid arthritis.

Alekseyenko AV, Lytkin NI, Ai J, Ding B, Padyukov L, Aliferis CF, Statnikov A.

Biol Direct. 2011 May 18;6:25. doi: 10.1186/1745-6150-6-25.

20.

Bioinformatics challenges for genome-wide association studies.

Moore JH, Asselbergs FW, Williams SM.

Bioinformatics. 2010 Feb 15;26(4):445-55. doi: 10.1093/bioinformatics/btp713. Epub 2010 Jan 6. Review.

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