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Results: 1 to 20 of 190

1.

Upstream sequence elements direct post-transcriptional regulation of gene expression under stress conditions in yeast.

Lawless C, Pearson RD, Selley JN, Smirnova JB, Grant CM, Ashe MP, Pavitt GD, Hubbard SJ.

BMC Genomics. 2009 Jan 7;10:7. doi: 10.1186/1471-2164-10-7.

PMID:
19128476
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Extensive transcript diversity and novel upstream open reading frame regulation in yeast.

Waern K, Snyder M.

G3 (Bethesda). 2013 Feb;3(2):343-52. doi: 10.1534/g3.112.003640. Epub 2013 Feb 1.

PMID:
23390610
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Identification and characterization of upstream open reading frames (uORF) in the 5' untranslated regions (UTR) of genes in Saccharomyces cerevisiae.

Zhang Z, Dietrich FS.

Curr Genet. 2005 Aug;48(2):77-87. Epub 2005 Sep 14.

PMID:
16012843
[PubMed - indexed for MEDLINE]
4.

Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation.

Cvijović M, Dalevi D, Bilsland E, Kemp GJ, Sunnerhagen P.

BMC Bioinformatics. 2007 Aug 8;8:295.

PMID:
17686169
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The yeast transcription factor genes YAP1 and YAP2 are subject to differential control at the levels of both translation and mRNA stability.

Vilela C, Linz B, Rodrigues-Pousada C, McCarthy JE.

Nucleic Acids Res. 1998 Mar 1;26(5):1150-9.

PMID:
9469820
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Dual modes of natural selection on upstream open reading frames.

Neafsey DE, Galagan JE.

Mol Biol Evol. 2007 Aug;24(8):1744-51. Epub 2007 May 9.

PMID:
17494029
[PubMed - indexed for MEDLINE]
Free Article
7.

Folding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast.

Ringnér M, Krogh M.

PLoS Comput Biol. 2005 Dec;1(7):e72. Epub 2005 Dec 9.

PMID:
16355254
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Predicting functional upstream open reading frames in Saccharomyces cerevisiae.

Selpi, Bryant CH, Kemp GJ, Sarv J, Kristiansson E, Sunnerhagen P.

BMC Bioinformatics. 2009;10:451. doi: 10.1186/1471-2105-10-451. Epub 2009 Dec 30.

PMID:
20042076
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Post-transcriptional control of a glucoamylase gene from Trichoderma harzianum under stress conditions.

de Las Mercedes Dana M, Pintor-Toro JA.

Mol Microbiol. 2005 Jul;57(1):250-60.

PMID:
15948964
[PubMed - indexed for MEDLINE]
10.

Fail-safe mechanism of GCN4 translational control--uORF2 promotes reinitiation by analogous mechanism to uORF1 and thus secures its key role in GCN4 expression.

Gunišová S, Valášek LS.

Nucleic Acids Res. 2014 May;42(9):5880-93. doi: 10.1093/nar/gku204. Epub 2014 Mar 12.

PMID:
24623812
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Analysis of Saccharomyces cerevisiae genome for the distributions of stress-response elements potentially affecting gene expression by transcriptional interference.

Liu Y, Ye S, Erkine AM.

In Silico Biol. 2009;9(5-6):379-89. doi: 10.3233/ISB-2009-0412.

PMID:
22430439
[PubMed - indexed for MEDLINE]
12.

Poly(A)-tail-promoted translation in yeast: implications for translational control.

Preiss T, Muckenthaler M, Hentze MW.

RNA. 1998 Nov;4(11):1321-31.

PMID:
9814754
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Translational repression of the McKusick-Kaufman syndrome transcript by unique upstream open reading frames encoding mitochondrial proteins with alternative polyadenylation sites.

Akimoto C, Sakashita E, Kasashima K, Kuroiwa K, Tominaga K, Hamamoto T, Endo H.

Biochim Biophys Acta. 2013 Mar;1830(3):2728-38.

PMID:
23671934
[PubMed - indexed for MEDLINE]
14.

Known and novel post-transcriptional regulatory sequences are conserved across plant families.

Vaughn JN, Ellingson SR, Mignone F, Arnim Av.

RNA. 2012 Mar;18(3):368-84. doi: 10.1261/rna.031179.111. Epub 2012 Jan 11.

PMID:
22237150
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Identification of potential regulatory elements in the 5' and 3' UTRs of 12 translationally regulated mRNAs in mammalian spermatids by comparative genomics.

Chowdhury TA, Kleene KC.

J Androl. 2012 Mar-Apr;33(2):244-56. doi: 10.2164/jandrol.110.012492. Epub 2011 May 5.

PMID:
21546614
[PubMed - indexed for MEDLINE]
Free Article
16.

Regulation of plant translation by upstream open reading frames.

von Arnim AG, Jia Q, Vaughn JN.

Plant Sci. 2014 Jan;214:1-12. doi: 10.1016/j.plantsci.2013.09.006. Epub 2013 Sep 18. Review.

PMID:
24268158
[PubMed - indexed for MEDLINE]
17.

Translational control of protein kinase Ceta by two upstream open reading frames.

Raveh-Amit H, Maissel A, Poller J, Marom L, Elroy-Stein O, Shapira M, Livneh E.

Mol Cell Biol. 2009 Nov;29(22):6140-8. doi: 10.1128/MCB.01044-09. Epub 2009 Sep 21.

PMID:
19797084
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Low temperature regulated DEAD-box RNA helicase from the Antarctic archaeon, Methanococcoides burtonii.

Lim J, Thomas T, Cavicchioli R.

J Mol Biol. 2000 Mar 31;297(3):553-67.

PMID:
10731411
[PubMed - indexed for MEDLINE]
19.

A single inhibitory upstream open reading frame (uORF) is sufficient to regulate Candida albicans GCN4 translation in response to amino acid starvation conditions.

Sundaram A, Grant CM.

RNA. 2014 Apr;20(4):559-67. doi: 10.1261/rna.042267.113. Epub 2014 Feb 25.

PMID:
24570481
[PubMed - indexed for MEDLINE]
20.

Translation reinitiation relies on the interaction between eIF3a/TIF32 and progressively folded cis-acting mRNA elements preceding short uORFs.

Munzarová V, Pánek J, Gunišová S, Dányi I, Szamecz B, Valášek LS.

PLoS Genet. 2011 Jul;7(7):e1002137. doi: 10.1371/journal.pgen.1002137. Epub 2011 Jul 7.

PMID:
21750682
[PubMed - indexed for MEDLINE]
Free PMC Article
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