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Results: 1 to 20 of 43

Related Citations for PubMed (Select 19040716)

1.

A survey of visualization tools for biological network analysis.

Pavlopoulos GA, Wegener AL, Schneider R.

BioData Min. 2008 Nov 28;1:12. doi: 10.1186/1756-0381-1-12.

2.

A reference guide for tree analysis and visualization.

Pavlopoulos GA, Soldatos TG, Barbosa-Silva A, Schneider R.

BioData Min. 2010 Feb 22;3(1):1. doi: 10.1186/1756-0381-3-1.

3.

Linking Cytoscape and the corynebacterial reference database CoryneRegNet.

Baumbach J, Apeltsin L.

BMC Genomics. 2008 Apr 21;9:184. doi: 10.1186/1471-2164-9-184.

4.

BioGraphE: high-performance bionetwork analysis using the Biological Graph Environment.

Chin G Jr, Chavarria DG, Nakamura GC, Sofia HJ.

BMC Bioinformatics. 2008 May 28;9 Suppl 6:S6. doi: 10.1186/1471-2105-9-S6-S6.

5.

A linear programming approach for estimating the structure of a sparse linear genetic network from transcript profiling data.

Bhadra S, Bhattacharyya C, Chandra NR, Mian IS.

Algorithms Mol Biol. 2009 Feb 24;4:5. doi: 10.1186/1748-7188-4-5.

6.

GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

BMC Bioinformatics. 2006 Oct 24;7:470.

7.

In situ exploration of large dynamic networks.

Hadlak S, Schulz HJ, Schumann H.

IEEE Trans Vis Comput Graph. 2011 Dec;17(12):2334-43. doi: 10.1109/TVCG.2011.213.

PMID:
22034354
8.

Network Analysis Tools: from biological networks to clusters and pathways.

Brohée S, Faust K, Lima-Mendez G, Vanderstocken G, van Helden J.

Nat Protoc. 2008;3(10):1616-29. doi: 10.1038/nprot.2008.100.

PMID:
18802442
9.

Network visualization and network analysis.

Nikiforova VJ, Willmitzer L.

EXS. 2007;97:245-75. Review.

PMID:
17432271
10.

Web-based interactive 2D/3D medical image processing and visualization software.

Mahmoudi SE, Akhondi-Asl A, Rahmani R, Faghih-Roohi S, Taimouri V, Sabouri A, Soltanian-Zadeh H.

Comput Methods Programs Biomed. 2010 May;98(2):172-82. doi: 10.1016/j.cmpb.2009.11.012.

PMID:
20022133
11.

Network graph analysis of category fluency testing.

Lerner AJ, Ogrocki PK, Thomas PJ.

Cogn Behav Neurol. 2009 Mar;22(1):45-52. doi: 10.1097/WNN.0b013e318192ccaf.

PMID:
19372770
12.

Flow mapping and multivariate visualization of large spatial interaction data.

Guo D.

IEEE Trans Vis Comput Graph. 2009 Nov-Dec;15(6):1041-8. doi: 10.1109/TVCG.2009.143.

PMID:
19834170
13.
14.

GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments.

Keller A, Backes C, Al-Awadhi M, Gerasch A, Küntzer J, Kohlbacher O, Kaufmann M, Lenhof HP.

BMC Bioinformatics. 2008 Dec 22;9:552. doi: 10.1186/1471-2105-9-552.

15.

Medusa: A tool for exploring and clustering biological networks.

Pavlopoulos GA, Hooper SD, Sifrim A, Schneider R, Aerts J.

BMC Res Notes. 2011 Oct 6;4:384. doi: 10.1186/1756-0500-4-384.

16.

[Dynamic paradigm in psychopathology: "chaos theory", from physics to psychiatry].

Pezard L, Nandrino JL.

Encephale. 2001 May-Jun;27(3):260-8. French.

PMID:
11488256
17.

GOLEM: an interactive graph-based gene-ontology navigation and analysis tool.

Sealfon RS, Hibbs MA, Huttenhower C, Myers CL, Troyanskaya OG.

BMC Bioinformatics. 2006 Oct 10;7:443.

18.

Computational tools for the modern andrologist.

Niederberger C.

J Androl. 1996 Sep-Oct;17(5):462-6. Review.

PMID:
8957688
19.

Network analysis approach for biology.

Kwoh CK, Ng PY.

Cell Mol Life Sci. 2007 Jul;64(14):1739-51. Review.

PMID:
17415520
20.

POINeT: protein interactome with sub-network analysis and hub prioritization.

Lee SA, Chan CH, Chen TC, Yang CY, Huang KC, Tsai CH, Lai JM, Wang FS, Kao CY, Huang CY.

BMC Bioinformatics. 2009 Apr 21;10:114. doi: 10.1186/1471-2105-10-114.

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