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Items: 1 to 20 of 179

1.

A comprehensive functional analysis of tissue specificity of human gene expression.

Dezso Z, Nikolsky Y, Sviridov E, Shi W, Serebriyskaya T, Dosymbekov D, Bugrim A, Rakhmatulin E, Brennan RJ, Guryanov A, Li K, Blake J, Samaha RR, Nikolskaya T.

BMC Biol. 2008 Nov 12;6:49. doi: 10.1186/1741-7007-6-49.

2.

Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles.

Prieto C, Risueño A, Fontanillo C, De las Rivas J.

PLoS One. 2008;3(12):e3911. doi: 10.1371/journal.pone.0003911. Epub 2008 Dec 15.

3.

Definition, conservation and epigenetics of housekeeping and tissue-enriched genes.

She X, Rohl CA, Castle JC, Kulkarni AV, Johnson JM, Chen R.

BMC Genomics. 2009 Jun 17;10:269. doi: 10.1186/1471-2164-10-269.

4.

Gene expression in chicken reveals correlation with structural genomic features and conserved patterns of transcription in the terrestrial vertebrates.

Nie H, Crooijmans RP, Lammers A, van Schothorst EM, Keijer J, Neerincx PB, Leunissen JA, Megens HJ, Groenen MA.

PLoS One. 2010 Aug 5;5(8):e11990. doi: 10.1371/journal.pone.0011990.

5.

Chicken skeletal muscle-associated macroarray for gene discovery.

Jorge EC, Melo CM, Rosário MF, Rossi JR, Ledur MC, Moura AS, Coutinho LL.

Genet Mol Res. 2010 Feb 2;9(1):188-207. doi: 10.4238/vol9-1gmr712.

6.

Novel functional view of the crocidolite asbestos-treated A549 human lung epithelial transcriptome reveals an intricate network of pathways with opposing functions.

Hevel JM, Olson-Buelow LC, Ganesan B, Stevens JR, Hardman JP, Aust AE.

BMC Genomics. 2008 Aug 7;9:376. doi: 10.1186/1471-2164-9-376.

7.

Identification and target prediction of miRNAs specifically expressed in rat neural tissue.

Hua YJ, Tang ZY, Tu K, Zhu L, Li YX, Xie L, Xiao HS.

BMC Genomics. 2009 May 9;10:214. doi: 10.1186/1471-2164-10-214.

8.

D-Serine exposure resulted in gene expression changes implicated in neurodegenerative disorders and neuronal dysfunction in male Fischer 344 rats.

Davidson ME, Kerepesi LA, Soto A, Chan VT.

Arch Toxicol. 2009 Aug;83(8):747-62. doi: 10.1007/s00204-009-0405-3. Epub 2009 Feb 11.

PMID:
19212759
9.

Characterization of regulatory features of housekeeping and tissue-specific regulators within tissue regulatory networks.

Li P, Hua X, Zhang Z, Li J, Wang J.

BMC Syst Biol. 2013 Oct 31;7:112. doi: 10.1186/1752-0509-7-112.

10.

An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer.

Xu M, Kao MC, Nunez-Iglesias J, Nevins JR, West M, Zhou XJ.

BMC Genomics. 2008;9 Suppl 1:S12. doi: 10.1186/1471-2164-9-S1-S12.

11.

The functional landscape of mouse gene expression.

Zhang W, Morris QD, Chang R, Shai O, Bakowski MA, Mitsakakis N, Mohammad N, Robinson MD, Zirngibl R, Somogyi E, Laurin N, Eftekharpour E, Sat E, Grigull J, Pan Q, Peng WT, Krogan N, Greenblatt J, Fehlings M, van der Kooy D, Aubin J, Bruneau BG, Rossant J, Blencowe BJ, Frey BJ, Hughes TR.

J Biol. 2004;3(5):21. Epub 2004 Dec 6.

12.

Genome-wide profiling of gene expression in 29 normal human tissues with a cDNA microarray.

Saito-Hisaminato A, Katagiri T, Kakiuchi S, Nakamura T, Tsunoda T, Nakamura Y.

DNA Res. 2002 Apr 30;9(2):35-45.

13.
14.

How many human genes can be defined as housekeeping with current expression data?

Zhu J, He F, Song S, Wang J, Yu J.

BMC Genomics. 2008 Apr 16;9:172. doi: 10.1186/1471-2164-9-172.

15.

Tissue-specific functions based on information content of gene ontology using cap analysis gene expression.

Maekawa S, Matsumoto A, Takenaka Y, Matsuda H.

Med Biol Eng Comput. 2007 Nov;45(11):1029-36. Epub 2007 Oct 30.

PMID:
17968606
16.
17.

Identification of network topological units coordinating the global expression response to glucose in Bacillus subtilis and its comparison to Escherichia coli.

Vázquez CD, Freyre-González JA, Gosset G, Loza JA, Gutiérrez-Ríos RM.

BMC Microbiol. 2009 Aug 24;9:176. doi: 10.1186/1471-2180-9-176.

18.

Transcriptome architecture across tissues in the pig.

Ferraz AL, Ojeda A, López-Béjar M, Fernandes LT, Castelló A, Folch JM, Pérez-Enciso M.

BMC Genomics. 2008 Apr 16;9:173. doi: 10.1186/1471-2164-9-173.

19.

Identification of novel transcriptional networks in response to treatment with the anticarcinogen 3H-1,2-dithiole-3-thione.

Huang Y, Yan J, Lubet R, Kensler TW, Sutter TR.

Physiol Genomics. 2006 Jan 12;24(2):144-53. Epub 2005 Nov 29.

20.

Radiation-induced gene translation profiles reveal tumor type and cancer-specific components.

Kumaraswamy S, Chinnaiyan P, Shankavaram UT, Lü X, Camphausen K, Tofilon PJ.

Cancer Res. 2008 May 15;68(10):3819-26. doi: 10.1158/0008-5472.CAN-08-0016.

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