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Results: 1 to 20 of 86

1.

Is there a molecular key to the level of "biological species" in eukaryotes? A DNA guide.

Coleman AW.

Mol Phylogenet Evol. 2009 Jan;50(1):197-203. doi: 10.1016/j.ympev.2008.10.008. Epub 2008 Oct 21. Review. Erratum in: Mol Phylogenet Evol. 2011 Dec;61(3):978.

PMID:
18992828
[PubMed - indexed for MEDLINE]
2.

A close-up view on ITS2 evolution and speciation - a case study in the Ulvophyceae (Chlorophyta, Viridiplantae).

Caisová L, Marin B, Melkonian M.

BMC Evol Biol. 2011 Sep 20;11:262. doi: 10.1186/1471-2148-11-262.

PMID:
21933414
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Pan-eukaryote ITS2 homologies revealed by RNA secondary structure.

Coleman AW.

Nucleic Acids Res. 2007;35(10):3322-9. Epub 2007 Apr 25.

PMID:
17459886
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Paramecium aurelia revisited.

Coleman AW.

J Eukaryot Microbiol. 2005 Jan-Feb;52(1):68-77.

PMID:
15702983
[PubMed - indexed for MEDLINE]
5.

The advantages of the ITS2 region of the nuclear rDNA cistron for analysis of phylogenetic relationships of insects: a Drosophila example.

Young I, Coleman AW.

Mol Phylogenet Evol. 2004 Jan;30(1):236-42.

PMID:
15022773
[PubMed - indexed for MEDLINE]
6.

ITS-2 secondary structures and phylogeny of Anopheles culicifacies species.

Dassanayake RS, Gunawardene YI, Silva BD.

Bioinformation. 2008 Jul 31;2(10):456-60.

PMID:
18841242
[PubMed]
Free PMC Article
7.
8.

The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants.

Mai JC, Coleman AW.

J Mol Evol. 1997 Mar;44(3):258-71.

PMID:
9060392
[PubMed - indexed for MEDLINE]
9.

Secondary structure of the rRNA ITS2 region reveals key evolutionary patterns in acroporid corals.

Coleman AW, van Oppen MJ.

J Mol Evol. 2008 Oct;67(4):389-96. doi: 10.1007/s00239-008-9160-y. Epub 2008 Sep 10.

PMID:
18781354
[PubMed - indexed for MEDLINE]
10.

Global eukaryote phylogeny: Combined small- and large-subunit ribosomal DNA trees support monophyly of Rhizaria, Retaria and Excavata.

Moreira D, von der Heyden S, Bass D, López-García P, Chao E, Cavalier-Smith T.

Mol Phylogenet Evol. 2007 Jul;44(1):255-66. Epub 2006 Nov 15.

PMID:
17174576
[PubMed - indexed for MEDLINE]
11.

Exploring the phylogenetic utility of ITS sequences for animals: a test case for abalone (Haliotis).

Coleman AW, Vacquier VD.

J Mol Evol. 2002 Feb;54(2):246-57.

PMID:
11821917
[PubMed - indexed for MEDLINE]
12.

Analysis of the secondary structure of ITS transcripts in peritrich ciliates (Ciliophora, Oligohymenophorea): implications for structural evolution and phylogenetic reconstruction.

Sun P, Clamp JC, Xu D.

Mol Phylogenet Evol. 2010 Jul;56(1):242-51. doi: 10.1016/j.ympev.2010.02.030. Epub 2010 Mar 2.

PMID:
20206277
[PubMed - indexed for MEDLINE]
13.

Evolution of the 5.8S nrDNA gene and internal transcribed spacers in Carapichea ipecacuanha (Rubiaceae) within a phylogeographic context.

Queiroz Cde S, Batista FR, de Oliveira LO.

Mol Phylogenet Evol. 2011 May;59(2):293-302. doi: 10.1016/j.ympev.2011.01.013. Epub 2011 Feb 12.

PMID:
21300163
[PubMed - indexed for MEDLINE]
14.

Molecular evolution and phylogenetic utility of the internal transcribed spacer 2 (ITS2) in Calyptratae (Diptera: Brachycera).

Song ZK, Wang XZ, Liang GQ.

J Mol Evol. 2008 Nov;67(5):448-64. doi: 10.1007/s00239-008-9144-y. Epub 2008 Oct 11.

PMID:
18850061
[PubMed - indexed for MEDLINE]
15.

Analysis of the internal transcribed spacer 2 (ITS2) region of scuticociliates and related taxa (Ciliophora, Oligohymenophorea) to infer their evolution and phylogeny.

Miao M, Warren A, Song W, Wang S, Shang H, Chen Z.

Protist. 2008 Oct;159(4):519-33. doi: 10.1016/j.protis.2008.05.002.

PMID:
18675585
[PubMed - indexed for MEDLINE]
16.

European Lymnaeidae (Mollusca: Gastropoda), intermediate hosts of trematodiases, based on nuclear ribosomal DNA ITS-2 sequences.

Bargues MD, Vigo M, Horak P, Dvorak J, Patzner RA, Pointier JP, Jackiewicz M, Meier-Brook C, Mas-Coma S.

Infect Genet Evol. 2001 Dec;1(2):85-107.

PMID:
12798024
[PubMed - indexed for MEDLINE]
17.

Phylogenetic hypotheses of gorgoniid octocorals according to ITS2 and their predicted RNA secondary structures.

Aguilar C, Sánchez JA.

Mol Phylogenet Evol. 2007 Jun;43(3):774-86. Epub 2006 Nov 17.

PMID:
17254805
[PubMed - indexed for MEDLINE]
18.

Evolutionary diversification indicated by compensatory base changes in ITS2 secondary structures in a complex fungal species, Rhizoctonia solani.

Ahvenniemi P, Wolf M, Lehtonen MJ, Wilson P, German-Kinnari M, Valkonen JP.

J Mol Evol. 2009 Aug;69(2):150-63. doi: 10.1007/s00239-009-9260-3. Epub 2009 Jul 16.

PMID:
19609478
[PubMed - indexed for MEDLINE]
19.

Evolutionary convergence on highly-conserved 3' intron structures in intron-poor eukaryotes and insights into the ancestral eukaryotic genome.

Irimia M, Roy SW.

PLoS Genet. 2008 Aug 8;4(8):e1000148. doi: 10.1371/journal.pgen.1000148.

PMID:
18688272
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Unusual structure of ribosomal DNA in the copepod Tigriopus californicus: intergenic spacer sequences lack internal subrepeats.

Burton RS, Metz EC, Flowers JM, Willett CS.

Gene. 2005 Jan 3;344:105-13.

PMID:
15656977
[PubMed - indexed for MEDLINE]

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