Similar articles for PMID: 18953044

Year	Number of Results
2000	1
2003	1
2004	1
2005	9
2006	11
2007	12
2008	8
2009	5
2010	7
2011	4
2012	4
2013	3
2024	0

1

BASH: a tool for managing BeadArray spatial artefacts.

Cairns JM, Dunning MJ, Ritchie ME, Russell R, Lynch AG. Cairns JM, et al. Bioinformatics. 2008 Dec 15;24(24):2921-2. doi: 10.1093/bioinformatics/btn557. Epub 2008 Oct 25. Bioinformatics. 2008. PMID: 18953044 Free PMC article.

2

beadarray: R classes and methods for Illumina bead-based data.

Dunning MJ, Smith ML, Ritchie ME, Tavaré S. Dunning MJ, et al. Bioinformatics. 2007 Aug 15;23(16):2183-4. doi: 10.1093/bioinformatics/btm311. Epub 2007 Jun 22. Bioinformatics. 2007. PMID: 17586828

3

lumi: a pipeline for processing Illumina microarray.

Du P, Kibbe WA, Lin SM. Du P, et al. Bioinformatics. 2008 Jul 1;24(13):1547-8. doi: 10.1093/bioinformatics/btn224. Epub 2008 May 8. Bioinformatics. 2008. PMID: 18467348

4

BeadArray expression analysis using bioconductor.

Ritchie ME, Dunning MJ, Smith ML, Shi W, Lynch AG. Ritchie ME, et al. PLoS Comput Biol. 2011 Dec;7(12):e1002276. doi: 10.1371/journal.pcbi.1002276. Epub 2011 Dec 1. PLoS Comput Biol. 2011. PMID: 22144879 Free PMC article.

5

A framework for oligonucleotide microarray preprocessing.

Carvalho BS, Irizarry RA. Carvalho BS, et al. Bioinformatics. 2010 Oct 1;26(19):2363-7. doi: 10.1093/bioinformatics/btq431. Epub 2010 Aug 5. Bioinformatics. 2010. PMID: 20688976 Free PMC article.

6

CGHnormaliter: a Bioconductor package for normalization of array CGH data with many CNAs.

van Houte BP, Binsl TW, Hettling H, Heringa J. van Houte BP, et al. Bioinformatics. 2010 May 15;26(10):1366-7. doi: 10.1093/bioinformatics/btq155. Epub 2010 Apr 23. Bioinformatics. 2010. PMID: 20418341

7

Model-based variance-stabilizing transformation for Illumina microarray data.

Lin SM, Du P, Huber W, Kibbe WA. Lin SM, et al. Nucleic Acids Res. 2008 Feb;36(2):e11. doi: 10.1093/nar/gkm1075. Epub 2008 Jan 4. Nucleic Acids Res. 2008. PMID: 18178591 Free PMC article.

8

Statistical methods of background correction for Illumina BeadArray data.

Xie Y, Wang X, Story M. Xie Y, et al. Bioinformatics. 2009 Mar 15;25(6):751-7. doi: 10.1093/bioinformatics/btp040. Epub 2009 Feb 4. Bioinformatics. 2009. PMID: 19193732 Free PMC article.

9

A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data.

Barbosa-Morais NL, Dunning MJ, Samarajiwa SA, Darot JF, Ritchie ME, Lynch AG, Tavaré S. Barbosa-Morais NL, et al. Nucleic Acids Res. 2010 Jan;38(3):e17. doi: 10.1093/nar/gkp942. Epub 2009 Nov 18. Nucleic Acids Res. 2010. PMID: 19923232 Free PMC article.

10

pcaMethods--a bioconductor package providing PCA methods for incomplete data.

Stacklies W, Redestig H, Scholz M, Walther D, Selbig J. Stacklies W, et al. Bioinformatics. 2007 May 1;23(9):1164-7. doi: 10.1093/bioinformatics/btm069. Epub 2007 Mar 7. Bioinformatics. 2007. PMID: 17344241

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