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Results: 1 to 20 of 91

Similar articles for PubMed (Select 18840286)

1.

Bayesian modeling of recombination events in bacterial populations.

Marttinen P, Baldwin A, Hanage WP, Dowson C, Mahenthiralingam E, Corander J.

BMC Bioinformatics. 2008 Oct 7;9:421. doi: 10.1186/1471-2105-9-421.

2.

Bayesian semi-supervised classification of bacterial samples using MLST databases.

Cheng L, Connor TR, Aanensen DM, Spratt BG, Corander J.

BMC Bioinformatics. 2011 Jul 26;12:302. doi: 10.1186/1471-2105-12-302.

3.

SlidingBayes: exploring recombination using a sliding window approach based on Bayesian phylogenetic inference.

Paraskevis D, Deforche K, Lemey P, Magiorkinis G, Hatzakis A, Vandamme AM.

Bioinformatics. 2005 Apr 1;21(7):1274-5. Epub 2004 Nov 16.

4.

Identifying currents in the gene pool for bacterial populations using an integrative approach.

Tang J, Hanage WP, Fraser C, Corander J.

PLoS Comput Biol. 2009 Aug;5(8):e1000455. doi: 10.1371/journal.pcbi.1000455. Epub 2009 Aug 7.

5.

Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations.

Corander J, Marttinen P, Sirén J, Tang J.

BMC Bioinformatics. 2008 Dec 16;9:539. doi: 10.1186/1471-2105-9-539.

6.

TOPALi: software for automatic identification of recombinant sequences within DNA multiple alignments.

Milne I, Wright F, Rowe G, Marshall DF, Husmeier D, McGuire G.

Bioinformatics. 2004 Jul 22;20(11):1806-7. Epub 2004 Feb 26.

7.

GARD: a genetic algorithm for recombination detection.

Kosakovsky Pond SL, Posada D, Gravenor MB, Woelk CH, Frost SD.

Bioinformatics. 2006 Dec 15;22(24):3096-8. Epub 2006 Nov 16.

8.

PhyloPat: phylogenetic pattern analysis of eukaryotic genes.

Hulsen T, de Vlieg J, Groenen PM.

BMC Bioinformatics. 2006 Sep 1;7:398.

9.
10.

Pattern locator: a new tool for finding local sequence patterns in genomic DNA sequences.

Mrázek J, Xie S.

Bioinformatics. 2006 Dec 15;22(24):3099-100. Epub 2006 Nov 8.

11.

Dual multiple change-point model leads to more accurate recombination detection.

Minin VN, Dorman KS, Fang F, Suchard MA.

Bioinformatics. 2005 Jul 1;21(13):3034-42. Epub 2005 May 24.

12.

Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus.

Brendel V, Xing L, Zhu W.

Bioinformatics. 2004 May 1;20(7):1157-69. Epub 2004 Feb 5.

13.

Haplotypes histories as pathways of recombinations.

El-Mabrouk N, Labuda D.

Bioinformatics. 2004 Aug 12;20(12):1836-41. Epub 2004 Feb 26.

14.

Splice site identification by idlBNs.

Castelo R, Guigó R.

Bioinformatics. 2004 Aug 4;20 Suppl 1:i69-76.

15.

Detecting interspecific recombination with a pruned probabilistic divergence measure.

Husmeier D, Wright F, Milne I.

Bioinformatics. 2005 May 1;21(9):1797-806. Epub 2004 Nov 30.

16.

RDP2: recombination detection and analysis from sequence alignments.

Martin DP, Williamson C, Posada D.

Bioinformatics. 2005 Jan 15;21(2):260-2. Epub 2004 Sep 17.

17.

Spectrum: joint Bayesian inference of population structure and recombination events.

Sohn KA, Xing EP.

Bioinformatics. 2007 Jul 1;23(13):i479-89.

18.

Dragon Promoter Mapper (DPM): a Bayesian framework for modelling promoter structures.

Chowdhary R, Tan SL, Ali RA, Boerlage B, Wong L, Bajic VB.

Bioinformatics. 2006 Sep 15;22(18):2310-2. Epub 2006 Apr 13.

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